Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01741 atgttggctgggtgttctagttcgacattgttgtcacctaggcacagattgaggagcgaagcatctgcacagtttcaagcctgccacttccagctaccttccatgagcacgcagagattggacttgccatgcaccacgagcttccctcgcaaggacacttcttcgcgctctcagcccttaagacccgtgggcctttctgtggacaaacccatcgattccaagaccagctcctgttctctcaagcacaacattcgcctccctcctctggccatcacagctcccttacccttgggggaagattccatcaaggataagagtctgaaaaggctcgccgaccacgatgactccttcgccaacatacccaagaggaaaaagagcaccatttctgagcgtaactgtgagtgtgataacctgtggtttcagtctgctgctactgagactgctgctgccaacacttcacttgatttctcttctgaggaagagagggtttgctttgttccttctcaactcgtatctcattctgcacccttgcctttgaccccttggctggaatcatgcgtcaacaagatgaccaattttggtgaaggcagtcaccgtcctcctcctcctcctcatcaccatcgtagcgaccatccaagggaagggtcggtctccaacgcttcttcagagacccaaagcctgaggttaaacgacaacgtatcggaacacgaagtgggaaacggttcggggaatccttaccatcagcacgaggtggagacaggggaagaggacgggcatcacgggtttgaacttgttagcttgctcaccgggtgcgttgacgctattggatccagaaacgtcactgcaatcaaccatttcatagccaagctcggtgatctggcttctccaaaaggaacccccataagccgcttatgtgcttacttcacagaagccttggctgtcagagtcacaaggctttggcctcacgtttttcacattaccaccacttcccgggacatggtggaggatgatgaaaccgccactgctttgagacttctcaaccaggtcactcccattcccaagttctttcatttcacatccaacgagatgctgttgagggcctttgaaggcaaggacagggttcacataatagacttcgacatcaagcaaggtcttcaatggcccagcttgttccagagccttgcttccagggcaaaccctcccactcacgtcagaatcacgggtattggcgagtccaagcaagaactgaacgaaaccggagacagactcgccggtttcgccgacgcgcttaaccttccctttgattttcaccccgttgtggacagactcgaagacgtcaggctgtggatgctgcacgtgaaggagcacgaaaccgtggctgttaactgcgttttgcagctgcacaagacgctttacgacggaagcggaggagctttgagggactttttgggactgatccgcagcaccaatcccagcatagttgtcatggctgaacaggaagcagagcacaacgaacccaggttggaggcaagggtctgcaattccttgaagtattactcagcattgtttgattccatggaggagagtgggcttccacaagagagtgcagtgagggtgaagattgaggaaatgtacgctaaggagattaggaacatcgttggttgtgaagggagggacaggttggagaggcaccagagttttgggaattggaagaggatgatggtggagcaaggagggttcagaagcctgggtgttactgagagggaaatgagtcagagccagttgctgttgaagatgtattcttgtcagagttacactgtgaagaagcaggagaaggagggagcaactgcggttactctgagttggttagagcaacctctgtatactgtttctgcttgggtgcctgtggatgttgccggtacctcgtcctcgttttctcagccaacttga 1950 0.0 MLAGCSSSTLLSPRHRLRSEASAQFQACHFQLPSMSTQRLDLPCTTSFPRKDTSSRSQPLRPVGLSVDKPIDSKTSSCSLKHNIRLPPLAITAPLPLGEDSIKDKSLKRLADHDDSFANIPKRKKSTISERNCECDNLWFQSAATETAAANTSLDFSSEEERVCFVPSQLVSHSAPLPLTPWLESCVNKMTNFGEGSHRPPPPPHHHRSDHPREGSVSNASSETQSLRLNDNVSEHEVGNGSGNPYHQHEVETGEEDGHHGFELVSLLTGCVDAIGSRNVTAINHFIAKLGDLASPKGTPISRLCAYFTEALAVRVTRLWPHVFHITTTSRDMVEDDETATALRLLNQVTPIPKFFHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRANPPTHVRITGIGESKQELNETGDRLAGFADALNLPFDFHPVVDRLEDVRLWMLHVKEHETVAVNCVLQLHKTLYDGSGGALRDFLGLIRSTNPSIVVMAEQEAEHNEPRLEARVCNSLKYYSALFDSMEESGLPQESAVRVKIEEMYAKEIRNIVGCEGRDRLERHQSFGNWKRMMVEQGGFRSLGVTEREMSQSQLLLKMYSCQSYTVKKQEKEGATAVTLSWLEQPLYTVSAWVPVDVAGTSSSFSQPT 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01741 649 MobiDBLite consensus disorder prediction 200 214 - -
Pste6g01741 649 MobiDBLite consensus disorder prediction 44 66 - -
Pste6g01741 649 MobiDBLite consensus disorder prediction 44 61 - -
Pste6g01741 649 Pfam GRAS domain family 264 633 IPR005202 -
Pste6g01741 649 MobiDBLite consensus disorder prediction 215 241 - -
Pste6g01741 649 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 211 629 IPR005202 -
Pste6g01741 649 ProSiteProfiles GRAS family profile. 255 634 IPR005202 -
Pste6g01741 649 MobiDBLite consensus disorder prediction 193 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01741 Pste-Chr6 7850997 7866899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01741 1 634 GRAS Transcription Factor Family AT1G63100 54.203 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste6g01741 GRAS 1.9e-125 CL0063