Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01731 GAACTTCCAATAGAGGTAGAGGACCCATTTTCTCTCTTTGTATATATTTTAAGTGAGGGTCTTAATCTGAGAGAACAAAAAGATGGGAAGGGCTCCCTGTTGTTCTAAAGTTGGCCTGCACAAAGGTCCTTGGACTCCCAAGGAAGATGCATTGCTTACCAAGTATATCCAAGCTCATGGAGAAGGCCAATGGAAATCACTACCCAAAAAAGCTGGGCTTCTTAGATGTGGAAAAAGTTGTAGATTGAGATGGATGAACTATCTCAGACCAGACATAAAGAGAGGAAACATAAGTTCCGACGAAGATGATCTTATAATCAGAATGCATTCACTTTTGGGAAATAGATGGTCCCTCATAGCAGGAAGGTTACCAGGAAGAACAGACAATGAAATAAAGAACTATTGGAACACCCATCTAAGCAAAAAGGTGAAAAATCAAGGAACAGAAGACAATAGCACTCCCAATATGTTAGAAAATCCTCAGGAAGAACCGGCCAGTGGCAACAAAAAGAAAAAGAGCAGTGGCAAAAAGAAGAATAAGCAGAAGAACAAAGTCACAAATAATGATGAGCCACAAAAAACACAAGTTTATCTACCAAAACCAATTAGAGTGAAGGCTTTGTATTTGCCAAGAACGGGTAGTAACACCTTCACCTTTGATCCCAATTCTCCTACCTTCACCTTTGATTCCAATTCACCAAGTGGATCTTCAAGCCAAGAAAAGGAGGAAAGCCCGATGGCAAAGGAATCAAACGTGGTTAGTAAAATGGGTAATGTGGGAGAAAGTGATGGTTTTGGCTTCTTCAATCAGGACCATGACTTGGTCAACGCCTCAGATATTGAATGCCACTCTTATTTTCCCACAGATCATGGCACGCTACAGCAGCTATATGAAGAATACTTCCAGCTCCTGAACATGGACCCTAGCCAATTCGATATCAATTCATTTGATCAGTCTTTGTTGGAGTGAAATTATGTAAACAAAAATTGGTTCATTTGCTAAGAATTATTCTCACGTCTTGCAATGGCGTGAGTCTAAGTCTTGATGTCAATATGAAGACTCTGTTTATAGGTATTCTGTAAGTAGTTCTGGGAAGCGTGTTTTGAATCTTGAAGCCTATCTCCATACTAATGAATTTCCCAAATCAAACTCACTTAAACTTTTTAGAAAAATTAAATAATGCTGAGGATATTGATCATGCTACTTTATATTTGTATAATTTGTGTTCTCTGACCCTATCTAATCTCATCTTGTTTATTGTACATTTAATAACTCTGTCACTTATGGCATGATGCATTGCAAAAACAATTGCCATTCATTGACTAACAAACCAGTCCTTGGGATTACGTCAATTCATATAATTTTTTCTTAAATGACAATTGGAGACATCATATATTTATACTAAATTAATATTTTTCATCGATAAAATTGTTTATTTATACAATATATCATGTTAATATAAATTTATAGCACTCGTAAAATTAATCTAATGTCAAATTGTTGATAAATTATAAATCTTTTTTATTGCGACGTGTGGTAATATACGCTACTATCTAGCAAGTGTCATTCAACCAAGA 1578 0.3612 MGRAPCCSKVGLHKGPWTPKEDALLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNISSDEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKVKNQGTEDNSTPNMLENPQEEPASGNKKKKSSGKKKNKQKNKVTNNDEPQKTQVYLPKPIRVKALYLPRTGSNTFTFDPNSPTFTFDSNSPSGSSSQEKEESPMAKESNVVSKMGNVGESDGFGFFNQDHDLVNASDIECHSYFPTDHGTLQQLYEEYFQLLNMDPSQFDINSFDQSLLE 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01731 295 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 219 - -
Pste6g01731 295 MobiDBLite consensus disorder prediction 187 214 - -
Pste6g01731 295 FunFam Myb transcription factor 11 67 - -
Pste6g01731 295 CDD SANT 16 61 IPR001005 -
Pste6g01731 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pste6g01731 295 Gene3D - 14 66 - -
Pste6g01731 295 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pste6g01731 295 MobiDBLite consensus disorder prediction 115 135 - -
Pste6g01731 295 MobiDBLite consensus disorder prediction 187 222 - -
Pste6g01731 295 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pste6g01731 295 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pste6g01731 295 SMART sant 13 63 IPR001005 -
Pste6g01731 295 SMART sant 66 114 IPR001005 -
Pste6g01731 295 MobiDBLite consensus disorder prediction 115 170 - -
Pste6g01731 295 CDD SANT 71 112 IPR001005 -
Pste6g01731 295 Gene3D - 69 135 - -
Pste6g01731 295 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste6g01731 295 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pste6g01731 295 FunFam Transcription factor TT2 70 139 - -
Pste6g01731 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01731 Pste-Chr6 7739429 7741170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01731 4 142 MYB Transcription Factor Family AT3G13540 63.636 1.72e-66 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste6g01731 Myb_DNA-binding 9.4e-14 CL0123