Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01719 GTTCATTACCTCCAACCATTGTCATCGAATGTCGATTCCAGTTGTGGTCGGCATTCGATTCCTCCTTCATTCAGTCCCAACCTTTCTACATTCCAATCACAAACTAGGCCCCATCCAATAATTACTAGAATGAATTCCAGTGTAATATTGACATTGCCCCTTCTAAGCAATGTGCTCAATACAAGGGAACCTCAATATATTGAGGATGACATTGTGGAGAAAGATCCAACTGGTCGTTACTTAAGGTACAATGAAATCTTGGGCAAGGGTGCCTTCAAAACCGTTTATAGGGGCTTTGATGAAGTGGATGGAATAGAAGTTGCTTGGAATCAAGTTAGGATTGATGGTCTCTTACATTCAACAGATGATCTTGCAAAATTATATTTTGAAGTTAATTTATTGAAGTCTTTGAATCATGAAAATATCATTAAGTTTTATGATTCTTGGATTGATGATAAGCAGAAAACTGTTAACATGATTACTGAACTCTTCACATCTGGAAATTTAAGGCAATATCGTAAGAAGCATAAATATGTTGAAATGAAAGCTATAAAAGGTTGGGCTAGGCAAATTCTTCATGGCTTAGTATACCTTCATAGTCACAAGCCACCTATTATTCATAGAGACTTGAAATGCGACAACATCTTCGTGAATGGAAACCAAGGTGAAGTTAAGATTGGGGACCTTGGTTTAGCAATTGTCATGCAACAACCAACTGCCCAAAGTGTTATTGGGACTCCTGAGTTTATGGCTCCAGAACTATATGAAGAGTCATACAATGAACTTGTTGATATCTATTCTTTTGGAATGTGCATATTGGAAATGGTTACTCTTGAGTATCCCTATAGTGAATGCAAAAACCCTGCTCAAATCTTTAAGAAAGTTACCACAGGTATTAAACCTGCTTCCCTTAATAAGGTGAGTGATCCCCAAATTAAAGAGTTTATTGAGAAATGTCTAGTTCCAGTATCTAAGAGATTACCGGCAGATGAGCTTCTTAAAGACCCGTTTCTACAAGTTGAAAATCCAAAGGATCCTATCCTTTATCCTTTACAACCAAATAGAAGAACACTAAGAGCATATTCATTCAACTCTGGTTCTCAATCTATGGATATGGATAATGACTACAAACAGTTTTCTACAAGTATTTGTTCTGAAAGTAACCAAGAAAACCCACATTGTCCTGTTTTTCAAGTACAAAGGGCAAGTAATAACAATGAGTTTAGGTTGAAAGGGACTAAAAATGACGATAACTCAATATCATTGACCTTGCGTATTGCTGATACATGTGGTCGAGTCAGGAATATACATTTTCTTTTTTACCTTGATACAGATACTGCCATCTCCGTGGCCACAGAGATGGTTGAACACTTGGACCTAGCAGATCATGATGTAGATTTAATAGCTGAACTTATTGATTACTTGTTATTGAAACTTCTCCCTTGGTGGAAGCCCTCACCTGACCATCGTTCACTTGGAGAATCACATTCTAATAGTACAAATATAGATAGCCAAAGCTTGGCATGGCCATGGGGTTTTGTACTAAATAGTATTCCTTCTGAAATAGCTATTGGTCAAGATGGCTTGTTTGAAAAGATTGACTTTACAAACAATTATGACAATGCTGCTTTTGAGAGTGATTATAATTCTTCTACTAGTTCGAATATTAAATTGGAAGGTCAATATTTACAAGAATCTGGAGTTTCTAATATGGTGGTTGATAATACTTATATAAAAAATGACAATTGTCATGGTTCCAATGTTGAAGCAAGTGCAAAATGCTTAAGTAGGTCCATCTCTGAACCTGAGGTTGGGGATACCTATTTTAAGGATTATAAATTGCAACCAATAGATTATTATGTTGGGGAAAGAGTTGAGGTAGATGAATTCCTAAAGAACTCAAAGCCAATTCTTGAACCATCTACTAATGTTGAGAGCTTGACAAGTACATGTTCATATGTGACTTCAAAAGAGAGTGACATTGATCTTCAACTAAAGTTTGAACTTCATTTAATTGATTCACACTATCAGTATTGGATTGATGAATTTAATAAAATGAAGTTGGAGGCATTGGAATCCACTAAAAGAAGATGGGAGGCTAAGAAAAAAATGGTTGTTCAGTGA 2124 0.3597 VHYLQPLSSNVDSSCGRHSIPPSFSPNLSTFQSQTRPHPIITRMNSSVILTLPLLSNVLNTREPQYIEDDIVEKDPTGRYLRYNEILGKGAFKTVYRGFDEVDGIEVAWNQVRIDGLLHSTDDLAKLYFEVNLLKSLNHENIIKFYDSWIDDKQKTVNMITELFTSGNLRQYRKKHKYVEMKAIKGWARQILHGLVYLHSHKPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAIVMQQPTAQSVIGTPEFMAPELYEESYNELVDIYSFGMCILEMVTLEYPYSECKNPAQIFKKVTTGIKPASLNKVSDPQIKEFIEKCLVPVSKRLPADELLKDPFLQVENPKDPILYPLQPNRRTLRAYSFNSGSQSMDMDNDYKQFSTSICSESNQENPHCPVFQVQRASNNNEFRLKGTKNDDNSISLTLRIADTCGRVRNIHFLFYLDTDTAISVATEMVEHLDLADHDVDLIAELIDYLLLKLLPWWKPSPDHRSLGESHSNSTNIDSQSLAWPWGFVLNSIPSEIAIGQDGLFEKIDFTNNYDNAAFESDYNSSTSSNIKLEGQYLQESGVSNMVVDNTYIKNDNCHGSNVEASAKCLSRSISEPEVGDTYFKDYKLQPIDYYVGERVEVDEFLKNSKPILEPSTNVESLTSTCSYVTSKESDIDLQLKFELHLIDSHYQYWIDEFNKMKLEALESTKRRWEAKKKMVVQ 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01719 707 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 420 473 IPR024678 GO:0004674|GO:0005524
Pste6g01719 707 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 68 571 - -
Pste6g01719 707 SMART serkin_6 81 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01719 707 SUPERFAMILY Protein kinase-like (PK-like) 82 397 IPR011009 -
Pste6g01719 707 Gene3D Transferase(Phosphotransferase) domain 1 164 343 - -
Pste6g01719 707 Pfam Protein kinase domain 84 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01719 707 FunFam probable serine/threonine-protein kinase WNK9 164 343 - -
Pste6g01719 707 ProSiteProfiles Protein kinase domain profile. 81 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01719 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Pste6g01719 707 Gene3D Phosphorylase Kinase; domain 1 66 162 - -
Pste6g01719 707 CDD STKc_WNK 79 338 - -
Pste6g01719 707 FunFam Probable serine/threonine-protein kinase WNK1 66 162 - -
Pste6g01719 707 Gene3D - 418 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01719 Pste-Chr6 7671297 7674847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01719 68 479 MAP Kinase Kinase Kinase AT1G64630 60.964 3.71e-168 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pste6g01719 Pkinase 4.8e-51 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01719 6 7671297 7674847 Pste6g01719 6 7671297 7674847 ECH