Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01717 atggttctgctagaacctgcggttttagaggaaagattttcacggttagaactggaggatgaaccaccacacagccattctacccaacaatgttccttcgcattacttccaataatgcgtacccaaaatgataatcatcaatacaatcacaacattgaagaaaatgctcgcgatcttctcaactttgttagaagctcaattctatccaatagtttgatgattaagtcagagaatctgctgtttgatttcttcaagcagagtattggggaaaataaagacatcgattacacaaagaagcttcatctttgcaaggtagctgaggattggatacaagcgcaaccgcaagaattgtatttgagttgggaagtgcagggaggaaggtgtatctacgttaaggagatggataagtatggggagtggaaaaactctgctgaagaaattcaacattgggccatggaactggccaacgaggtcttctcaaatttggtcaacgagttcatacttgacctcacgagtcacgacacataaaagatgggtaatcgtgaagaggaggcatctgaggtgaagaagtctccatcaccatatgatttgaattccaaggacaacccgggaggtttgatctctcaagtgcaacttcgaggagaaaactacgaaaagtgcgcccatgccatgagaatgtctttgcgtgcttgcagaaaatggggttttgtagaaggcagtggcaccattagaggaccaaaagaggggtcacgtgaaatggaagattggtggactgtataa 780 0.0 MVLLEPAVLEERFSRLELEDEPPHSHSTQQCSFALLPIMRTQNDNHQYNHNIEENARDLLNFVRSSILSNSLMIKSENLLFDFFKQSIGENKDIDYTKKLHLCKVAEDWIQAQPQELYLSWEVQGGRCIYVKEMDKYGEWKNSAEEIQHWAMELANEVFSNLVNEFILDLTSHDTXKMGNREEEASEVKKSPSPYDLNSKDNPGGLISQVQLRGENYEKCAHAMRMSLRACRKWGFVEGSGTIRGPKEGSREMEDWWTV 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01717 259 PANTHER OS04G0572500 PROTEIN 4 170 - -
Pste6g01717 259 MobiDBLite consensus disorder prediction 177 205 - -
Pste6g01717 259 Pfam gag-polypeptide of LTR copia-type 199 240 IPR029472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01717 Pste-Chr6 7656544 7658499 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01717 1 170 TRM (TON1 Recruiting Motif) Superfamily AT4G11780 31.609 4.31e-12 63.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01717 6 7656544 7658499 Pste6g01717 6 7656544 7658499 ECH