Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01711 CTGAATTCTCTTTCAGAGATGGTGGGAGTTTCCTAACCCCACGACATCACAACACAAGACAAATTTATCCAAAGCCAAACATGTGTTCAAACTTCAAAGACAGACTAATTGACGAGTCATTAGTTCTTAAGTCTTCAAAACTTGTATTTCTTGGACGAAAGGATTTCCCCTCTACAGCATCTTTGGAAAATTCCAGGCCTTAGCTTTGCTTGGTTTCCAAGCTAACACAATTCTAACGTTGTCTGCTTCTTCTAATGGTACAAATTACAATTTTTGTTTTTTCCGTCTACGTTACTTAACCAAATATCTTGCTTCACCATGCACCTTTGCAGTGTGTGTTAGAGGGATAAGTGGTGAATCGGGAGAAGCACATGAAGGTTCCAATGGAGGAAAAACCATTTCCTGCATGGTCATGGTGTGTTGAACAGTGCTTGAAAGAGTATGGTGTGAAACTGGACAAGGGTTTGAGTACCTATGAGGTTCAGAAGAGGCGTGAGAGGTATGGTTGGAATGAGCTAGCAAAGGAGAAAGGGAAGCCCTTGTGGGAACTAGTGTTGGAGCAATTTGATGACATGCTGGTGAAGATACTTCTGGCTGCAGCCTTCATATCATTTCTTTTGGCCTACTTTCACGGAAGTGACTCAGGGGAGTCTGGGTTTGAGGCTTATGTAGAGCCACTTGTGATAATTTTGATTTTGGTCCTTAACGCCATTGTTGGGGTTTGGCAAGAGAACAATGCAGAAAAGGCTCTTGAAGCTCTAAAAGAGTTGCAATGTGAATCTGGAAAAGTGTTAAGGGATGGCTATTTTGTGCCGAATTTGCCTGCAAGAGAGCTTGTTCCTGGTGATATTGTGGAGTTGCATGTTGGAGATAAGGTCCCTGCTGACATGAGAGTTGCGGCTTTGAAAACCTCAACTTTGAGGGTTGAGCAAAGTTCTTTAACTGGAGAAGCAATGCCAGTTCTTAAGGCGACAAATCTCATTTTCCTGGATGATTGTGAGTTGCAGGCTAAAGAAAACATGGTGTTTGCTGGTACCACTGTTGTCAATGGGAGTTGTGTTTGTATTGTCATCACAACAGGAATGGACACTGAAATTGGAAAGATACAGAAGCAGATACATGAGGCTTCTCAGGAGGAGACTGATACCCCTTTGAAGAAGAAGCTGGATGAGTTTGGTGGCAGGCTTACCACTGCAATTGGCTTAGTTTGTCTCATTGTTTGGGTTATTAACTACAAGAATTTCATTTCTTGGAATGTTGTGGATGGATGGCCCTCAAACATCAAATTTTCTGTCCAAAAGTGTACATACTATTTCAAAATTGCCGTTGCCCTTGCTGTTGCTGCAATCCCTGAAGGCCTTCCGGCTGTTATCACAACTTGTTTAGCTCTCGGCACGCGGAAAATGGCCCAAAAGAATGCAATTGTGAGAAAGCTTCCAAGTGTGGAAACTTTGGGATGTACCACTGTGATATGTTCAGACAAAACTGGGACCTTGACAACAAATCAGATGGCTGTGACAGAGTTCTTCACTTTGGGAGGGAAAACCACTGCTTCTAGAAACATTAGTGTTGAAGGCACAACTTATGATCCCAAAGATGGGGGCATTGTTGATTGGGGGTGCTATAACATGGATGCTAATTTGCAAGTCATGGCTGAAATATGTGCTGTTTGTAATGACGCTGGGATTTACTTCGATGGTCGCCTTTTTAGAGCCACAGGTTTGCCTACTGAAGCTGCTCTCAAAGTTTTGGTGGAGAAGATGGGAGTTTCAGATGTGAAGTCAAGGAACAAAATTCGCGACAATGCACAACTAGCTGCAAATAACATGGTGGATGGTAACACTGTTGTGAAGTTAGGATGGTGTGAGTGGTGGAATAAAAGATCCAAAAGGGTAGCTACATTGGAGTTTGATCGCATCCGGAAGTCAATGAGTGTTATTGTTCGTGAACCAAATGGTCAAAATCGGCTTCTAGTCAAGGGTGCTGTCGAGAGTTTACTGGAGCGTAGTTCACACGTGCAACTTGCTGATGGATCCTTGGTTCCAATAGATGATCAATGTAGGGAACTACTTCTTCAAAGACTCCAGGAGATGAGTTCAAAGGGATTGCGATGCTTGGGTTTTGCATATACCGATGACTTAGGAGAATTTTCTGACTATTATGCCGACACTCATCCTGCTCACAAGAAGTTGCTTGATCCAACATACTATTCATCTATTGAAAGTGATCTAGTTTTTGTTGGCATTGTTGGCTTAAGGGATCCTCCTCGTGAGGAAGTACACAAAGCAATTGAGGATTGTAAGGATGCTGGCATTAGAGTTATGGTAATAACAGGAGATAATAAATCAACCGCAGAGGCTATTTGTAGGGAAATCAAATTGTTCTCTGAAGATGAGGATCTCACTGAGCTAAGTTTGACTGGTAAGGAATTCATATCTCTTTCTCATTCAGAACAAGTTAAAATATTATTGAGACCTGGAGGCAAGGTTTTCTCTCGAGCTGAACCTAGACACAAGCAAGAAATTGTTAGACTACTGAAGGAAATGGGGGAGATTGTTGCAATGACCGGAGATGGTGTGAATGATGCACCTGCTCTTAAGCTTGCCGACATAGGGATTGCTATGGGCATAACTGGGACAGAGGTTGCTAAAGAAGCTTCAGATATGGTGCTTGCAGATGATAATTTTAGCACCATAGTTTCAGCTGTTGCTGAGGGTCGCTCTATTTATAATAACATGAAGTCATTTATCAGGTACATGATATCATCCAATGTTGGGGAAGTAATATCCATATTCTTGACCGCTGCTCTGGGGATCCCAGAATGCATGATACCAGTGCAACTTCTGTGGGTGAATTTGGTTACTGATGGTCCACCAGCAACAGCTCTAGGTTTTAATCCTGCTGATGTTGATATCATGCAGAAGCCACCTCGCAGAAGTGATGATCCTCTAATAAGTTCTTGGGTTCTTTTCCGTTATCTAGTAGTTGGTTCCTATGTGGGACTAGCAACAGTTGGCATTTTTGTCTTGTGGTACACTCAAGCATCTTTTCTTGGCATCAACCTTGTGAGTGATGGTCACACAATTATAGAATTGTCCCAGCTTCGCAACTGGGGGGATTGTCCCTCTTGGTCTAATTTCACTGTTGCTCCATTTGAGGTTGGAAGGGATCACTTGATCACATTTTCTAACCCTTGTGACTATTTCTCAATTGGCAAAGTAAAGGCCATGACTCTGTCTCTCTCGGTCTTGGTGGCAATTGAGATGTTTAACTCTTTGAATGCCCTCTCAGAAGAGAATAGCTTGAGGAAACTACCACCTTGGAGGAACCCTTGGCTTTTGGTAGCCATGTCAATATCATTCGGACTCCATTGCCTCATACTCTACACCCCATTCCTTGCACAAGTGTTTGGTGTTATTCCACTTAGTTTGAATGAGTGGTTTCTCGTACTTTTAATATCAGCACCTGTTATTCTTATTGATGAGATGCTAAAATTAGTGATGAGGAGTCAAAGAAAGTTGTTTACCAAGGAGAAAGAAGCATGAAGTGTCCCGTACATGGCCACTATATGTAGAAAGCAATAATACAAGAGGGAGATAGGCTGATAAACGGAAGTATCAAAGTCAAATTCTTTCATATACTTTTTCATTAGACTTTAGGAAATTACAGTTCATTAATTTATGGCAAGAAATTTGTCACTTTTTATGATTATCACGGTAAGTCGGTAAATATATTTTATGAACATCTTGTTTAGTTGGTCTTTCTTTTTTCATTTGAG 3778 0.4172 MKVPMEEKPFPAWSWCVEQCLKEYGVKLDKGLSTYEVQKRRERYGWNELAKEKGKPLWELVLEQFDDMLVKILLAAAFISFLLAYFHGSDSGESGFEAYVEPLVIILILVLNAIVGVWQENNAEKALEALKELQCESGKVLRDGYFVPNLPARELVPGDIVELHVGDKVPADMRVAALKTSTLRVEQSSLTGEAMPVLKATNLIFLDDCELQAKENMVFAGTTVVNGSCVCIVITTGMDTEIGKIQKQIHEASQEETDTPLKKKLDEFGGRLTTAIGLVCLIVWVINYKNFISWNVVDGWPSNIKFSVQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTEFFTLGGKTTASRNISVEGTTYDPKDGGIVDWGCYNMDANLQVMAEICAVCNDAGIYFDGRLFRATGLPTEAALKVLVEKMGVSDVKSRNKIRDNAQLAANNMVDGNTVVKLGWCEWWNKRSKRVATLEFDRIRKSMSVIVREPNGQNRLLVKGAVESLLERSSHVQLADGSLVPIDDQCRELLLQRLQEMSSKGLRCLGFAYTDDLGEFSDYYADTHPAHKKLLDPTYYSSIESDLVFVGIVGLRDPPREEVHKAIEDCKDAGIRVMVITGDNKSTAEAICREIKLFSEDEDLTELSLTGKEFISLSHSEQVKILLRPGGKVFSRAEPRHKQEIVRLLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYNNMKSFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRRSDDPLISSWVLFRYLVVGSYVGLATVGIFVLWYTQASFLGINLVSDGHTIIELSQLRNWGDCPSWSNFTVAPFEVGRDHLITFSNPCDYFSIGKVKAMTLSLSVLVAIEMFNSLNALSEENSLRKLPPWRNPWLLVAMSISFGLHCLILYTPFLAQVFGVIPLSLNEWFLVLLISAPVILIDEMLKLVMRSQRKLFTKEKEA 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01711 1057 CDD P-type_ATPase_SERCA 13 1045 - -
Pste6g01711 1057 PRINTS P-type cation-transporting ATPase superfamily signature 624 635 - -
Pste6g01711 1057 PRINTS P-type cation-transporting ATPase superfamily signature 756 768 - -
Pste6g01711 1057 PRINTS P-type cation-transporting ATPase superfamily signature 646 656 - -
Pste6g01711 1057 PRINTS P-type cation-transporting ATPase superfamily signature 368 382 - -
Pste6g01711 1057 PRINTS P-type cation-transporting ATPase superfamily signature 732 751 - -
Pste6g01711 1057 PRINTS P-type cation-transporting ATPase superfamily signature 186 200 - -
Pste6g01711 1057 SFLD p-type atpase 349 784 IPR044492 -
Pste6g01711 1057 NCBIfam HAD-IC family P-type ATPase 705 817 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste6g01711 1057 NCBIfam HAD-IC family P-type ATPase 306 392 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste6g01711 1057 SFLD Haloacid Dehalogenase 349 784 - -
Pste6g01711 1057 Pfam Cation transporting ATPase, C-terminus 817 1043 IPR006068 -
Pste6g01711 1057 SUPERFAMILY Calcium ATPase, transmembrane domain M 12 1048 IPR023298 -
Pste6g01711 1057 Gene3D - 63 1045 - -
Pste6g01711 1057 FunFam Calcium-transporting ATPase, putative 115 250 - -
Pste6g01711 1057 SMART Cation_ATPase_N_a_2 11 85 IPR004014 -
Pste6g01711 1057 SUPERFAMILY HAD-like 366 836 IPR036412 -
Pste6g01711 1057 Gene3D - 378 631 IPR023299 GO:0000166
Pste6g01711 1057 Gene3D - 30 252 - -
Pste6g01711 1057 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 378 631 - -
Pste6g01711 1057 FunFam Calcium-transporting P-type ATPase, putative 626 777 - -
Pste6g01711 1057 FunFam Calcium-transporting ATPase, putative 213 364 - -
Pste6g01711 1057 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 796 1050 - -
Pste6g01711 1057 Pfam E1-E2 ATPase 134 348 - -
Pste6g01711 1057 Coils Coil 1054 1057 - -
Pste6g01711 1057 SUPERFAMILY Calcium ATPase, transduction domain A 140 248 IPR008250 -
Pste6g01711 1057 PRINTS Sodium/potassium-transporting ATPase signature 361 382 - -
Pste6g01711 1057 PRINTS Sodium/potassium-transporting ATPase signature 985 1009 - -
Pste6g01711 1057 Gene3D - 365 777 IPR023214 -
Pste6g01711 1057 Pfam haloacid dehalogenase-like hydrolase 365 746 - -
Pste6g01711 1057 ProSitePatterns E1-E2 ATPases phosphorylation site. 370 376 IPR018303 -
Pste6g01711 1057 Pfam Cation transporter/ATPase, N-terminus 17 80 IPR004014 -
Pste6g01711 1057 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 375 628 IPR023299 GO:0000166
Pste6g01711 1057 PANTHER CALCIUM-TRANSPORTING ATPASE 20 1049 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01711 Pste-Chr6 7633536 7639578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01711 6 1054 Primary Pumps ATPases(2) AT4G00900 77.968 0.0 1698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01711 6 7633536 7639578 Pste6g01711 6 7633536 7639578 ECH