Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01695 atgtcagatgatgaagatgatttgcagatggatggctctttagatcaatctagcgctgacgggcatgacatgatgggatttggtccattgcttccaacagaatctgaaaggtccctcatggaaagagttcgtcaggaacttaagattgagctcaaacagggttttaagtcaagaattgaagatgttagggaggaaatattaaggaaacggagagcagggaaattaccaggtgatacaacatcggttttaaaggcatggtggcaacaacatgctaagtggccttatccaactgaagatgacaaggcaaaacttgtggaggagacagggttgcagctgaagcaaatcaataattggttcatcaatcaaaggaaacgcaactggcacagcaactctcaatcagttacttctctgaagtccaagcgcaagagatccgagtctggtacaaaggatgatagttga 459 0.0 MSDDEDDLQMDGSLDQSSADGHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKAWWQQHAKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKRSESGTKDDS 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01695 152 MobiDBLite consensus disorder prediction 138 152 - -
Pste6g01695 152 Pfam Homeobox KN domain 86 125 IPR008422 GO:0003677|GO:0006355
Pste6g01695 152 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 24 135 - -
Pste6g01695 152 FunFam homeobox protein knotted-1-like 3 isoform X1 67 128 - -
Pste6g01695 152 ProSiteProfiles ELK domain profile. 46 66 IPR005539 GO:0003677
Pste6g01695 152 MobiDBLite consensus disorder prediction 1 33 - -
Pste6g01695 152 SUPERFAMILY Homeodomain-like 68 133 IPR009057 -
Pste6g01695 152 CDD homeodomain 69 130 IPR001356 GO:0003677
Pste6g01695 152 Gene3D - 67 128 - -
Pste6g01695 152 ProSiteProfiles 'Homeobox' domain profile. 66 129 IPR001356 GO:0003677
Pste6g01695 152 SMART HOX_1 68 133 IPR001356 GO:0003677
Pste6g01695 152 MobiDBLite consensus disorder prediction 128 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01695 Pste-Chr6 7536424 7537501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01695 1 143 Homeobox Transcription Factor Family AT1G62990 86.301 2.54e-90 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pste6g01695 Homeobox_KN 5.2e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01695 6 7536424 7537501 Pste6g01695 6 7536424 7537501 ECH
Pste6g01695 6 7536424 7537501 Pste1g00544 1 1750001 1755887 PCT