Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01694 atgggaatgatgaacggagaagtgtccggcgccggcgaccaccaccaccgtcaagtgaaggcggagatagccacccaccctctttatgaacagcttcttgctgcacacgtgtcatgcctccgcgtcgccacgcccatcgatcagttgcctctcatcgacgctcagttgtcgcagtcccaccatctcctccgctcctatgcctcacaccattccctctcacctcatgaccgacaagacctcgacaacttcatggcacagtatctgattgtgttgtgtgcgttcaaagaacagcttcagcaacatgtgagggtgcatgccgtggaggctgttatggcctgccgtgatattgaaagtaccttgcaagctctcacaggtactctcttcatcttcaccccacactcctctttctttaatttcgttgctttctttccattcgatcccatcgtctcaggagttttttcttcgttttccgactctgttgttgcctttagtaatatgctatgctatgctatgcgatgcgaacaaacaaagggatcacttgatccatctatgaccggtgtattaattaaaaccaaatcaaatagttag 588 0.0 MGMMNGEVSGAGDHHHRQVKAEIATHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLSQSHHLLRSYASHHSLSPHDRQDLDNFMAQYLIVLCAFKEQLQQHVRVHAVEAVMACRDIESTLQALTGTLFIFTPHSSFFNFVAFFPFDPIVSGVFSSFSDSVVAFSNMLCYAMRCEQTKGSLDPSMTGVLIKTKSNS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01694 195 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 13 101 - -
Pste6g01694 195 SMART KNOX2_2 70 125 IPR005541 GO:0003677|GO:0005634
Pste6g01694 195 Pfam KNOX2 domain 73 124 IPR005541 GO:0003677|GO:0005634
Pste6g01694 195 Pfam KNOX1 domain 19 60 IPR005540 GO:0003677|GO:0005634
Pste6g01694 195 SMART KNOX1_2 17 61 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01694 Pste-Chr6 7531524 7532647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01694 1 167 Homeobox Transcription Factor Family AT1G62990 58.046 2.95e-62 193