Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01670 atggattctttctttctcattgttctcactttcgttttaggattccacattcattttgttcaaggaaatgaactacgttctactgcaagcagttcaaaaacatatattatccatgtgaaggaaccacaagctatgacacttgctcaatcaaaagatttagacagttggtaccattcattcatgccacctactattatgacctttgaggaagagtctcagattatttattcttaccggaacgtggtgaggggttttgctgcaagactcactgaagaagagcttatagctgtgaaaaagaagcatggttttatctctgctcttcccgaaaggatactacatcctcaaacaacacacacctcaacatttttggggttgcagcaagaaacgggattgtggaaagaatcaaactttggaaagggagtaattgttggggtgcttgattctggaatcacacctcatcatccttcattcagtgatgcagggatgccaccaccaccccccaaatggaaagggagatgcgaacttaatgtgacagcttgtaacaacaaactaattggagcaagatgtttcgaccatgcagccaaggtactgaagggagaaaaggcaccaattgatgaggatggacatggaactcacacagcaagcacagctgcaggtaattttgtagattatgcagatgtactaggaaatgccaaaggtacagcagcagggattgccccttatgctcaccttgcaatttacaaagtatgtgtcggaggacgctgtcgtgagagtgatatacttgccgcattggatgctgctgtcgaggatggcgtggacgtattatcaatatcccttggccaagatgaggttcttccttttttcagggatatcattgcaataggcacatttgcagcaatccagaatggaatctttgtaagttgttcagcaggaaactctggccctttccctggctccttaactaacggagccccttggatcctcacagttggggcaagcaatattgacagaagcattgtagcaacagtaaagctaggaaatggacaagaattagatggtgaatctgttttccagccatccaatttcactcaaacattgctacccttagcatatgctggaaagaatggtaaccaagaagctgcattttgttacaaaggatcgttggatgatattgatttcagagacaaggttgttttgtgtgaagaaggaaggggtataggaagaatttccaaaggacgggaagtaaaaagagtaggtggtgcagccatgattctcacaaatattgaaaccagtggctttactctccatgctgatgtacatgttctaccagcaacacatgtaagctacaatgctggacttcagatcaaagcctatattaattccactgcaacacctacagcaaccattttattcaagaacactgtaattggaaattctttagctcccgccgttgcatacttctcttcaagaggtcctagctcggcaacggcaagtgctggtattttgaaaccagacaccattggaccaggcttgaacatcttagctgcctggccattccccctgaataacaatatcgattcaaaatccactttcaacattttgtctggcacatcaatgtcatgcccacatctaagtggtgtagctgctttgctcaaaagctctcatcctcattggtcaccagctgctataaaatctgccataatgacttctgcagatgcaatcaatttggaacataaactcattgttgatgaaacacttcaccctgcagatgtctttgccacaggttctggtcacgtgaatccacaaagggcaaatgaccccggattagtttatgatatcgagcctgatgattacataccttatctgtgtggtttaggctatgatgatacagaagttgggatcattgcacacaaaacaattaagtgctctgagatttcaagcattgtcgaaggacaactcaactatccctcattttctgttgtgcttggttccccgaagacattcacaaggactgtgacaaatgtaggtgaggccaactcatcttatgttgtcgtggttgtggcaccagaaggggtcgatgtgaaggtccaaccaaataaactttacttttcagaagcaaaccagaaagaaacatattcagtgtccttcagccgtatagattggagtaatgaaaatgaaactgcagaatatgctcaaggttatttacaatgggtttctgccaaacataatgtaaggagtcctatcttggtcgacttttattaa 2262 0.0 MDSFFLIVLTFVLGFHIHFVQGNELRSTASSSKTYIIHVKEPQAMTLAQSKDLDSWYHSFMPPTIMTFEEESQIIYSYRNVVRGFAARLTEEELIAVKKKHGFISALPERILHPQTTHTSTFLGLQQETGLWKESNFGKGVIVGVLDSGITPHHPSFSDAGMPPPPPKWKGRCELNVTACNNKLIGARCFDHAAKVLKGEKAPIDEDGHGTHTASTAAGNFVDYADVLGNAKGTAAGIAPYAHLAIYKVCVGGRCRESDILAALDAAVEDGVDVLSISLGQDEVLPFFRDIIAIGTFAAIQNGIFVSCSAGNSGPFPGSLTNGAPWILTVGASNIDRSIVATVKLGNGQELDGESVFQPSNFTQTLLPLAYAGKNGNQEAAFCYKGSLDDIDFRDKVVLCEEGRGIGRISKGREVKRVGGAAMILTNIETSGFTLHADVHVLPATHVSYNAGLQIKAYINSTATPTATILFKNTVIGNSLAPAVAYFSSRGPSSATASAGILKPDTIGPGLNILAAWPFPLNNNIDSKSTFNILSGTSMSCPHLSGVAALLKSSHPHWSPAAIKSAIMTSADAINLEHKLIVDETLHPADVFATGSGHVNPQRANDPGLVYDIEPDDYIPYLCGLGYDDTEVGIIAHKTIKCSEISSIVEGQLNYPSFSVVLGSPKTFTRTVTNVGEANSSYVVVVVAPEGVDVKVQPNKLYFSEANQKETYSVSFSRIDWSNENETAEYAQGYLQWVSAKHNVRSPILVDFY 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01670 753 Pfam PA domain 375 455 IPR003137 -
Pste6g01670 753 Gene3D Peptidase S8/S53 domain 140 618 IPR036852 GO:0004252|GO:0006508
Pste6g01670 753 Pfam Subtilase family 138 572 IPR000209 GO:0006508|GO:0008236
Pste6g01670 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 114 IPR037045 -
Pste6g01670 753 FunFam Subtilisin-like protease SBT1.5 140 359 - -
Pste6g01670 753 Pfam Peptidase inhibitor I9 34 112 IPR010259 -
Pste6g01670 753 Gene3D - 336 477 - -
Pste6g01670 753 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Pste6g01670 753 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Pste6g01670 753 PRINTS Subtilisin serine protease family (S8) signature 535 551 IPR015500 -
Pste6g01670 753 ProSiteProfiles Serine proteases, subtilase domain profile. 122 605 - -
Pste6g01670 753 CDD PA_subtilisin_like 342 469 - -
Pste6g01670 753 Gene3D - 622 752 - -
Pste6g01670 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 749 IPR045051 -
Pste6g01670 753 CDD Peptidases_S8_3 112 572 IPR034197 -
Pste6g01670 753 SUPERFAMILY Subtilisin-like 115 609 IPR036852 GO:0004252|GO:0006508
Pste6g01670 753 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 143 154 IPR023827 -
Pste6g01670 753 FunFam subtilisin-like protease SBT1.5 336 476 - -
Pste6g01670 753 Pfam Fibronectin type-III domain 652 750 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01670 Pste-Chr6 7358252 7360654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01670 33 752 Subtilisin-like Serine Gene Family AT1G04110 45.707 0.0 602