Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01665 CACACACAACACAAACACACGCCTTTCTCTGTTTGTTAACAGACGTTGTCCATGCTTTATCGGTGTCTGTCTCTGTCGCGCACTGTCTCACTTTCTCTCTCTAAACCCTTTTCTTTCTATCTCTACCTGACTCAAATTCCCTCGTTTTAACGTTTTCCCGATTCGCCCCACTTTCCGCCGCGTGAGGCCCTCCCATGTGCTGACGTCGCCATGGGCCAGTGCTACGGCAAGACCAATCTCACGCCGGAAAATGAAGCCACCGCCGCAACCACCGCGGTCGTCCCCGGATCCGCCGATGTCCCGCCCTCCCCTCTGCCGCCCAAGGACACGCCCGCAAAGCCCAGCCCCTGGCCGAGTCCCTACCCCCACGGCGGCGGCGTTACGCCGTCTCCCGCCAGGGGCACTCCCAGGAGGTTTTTCCGGCGGCCGTTTCCGCCGCCGTCTCCAGCTAAGCACATACGGGCGTCGCTGGCGAAACGACTTGGGCACTCGAAGACACCGAAGGAGGGGCCGATCCCGGAGGAGCAAGCAGCGGCGGCGGCGGAGCAGTCGCTGGATAAGAGCTTTGGTTATGGTAAGAATTTTGGGGCGAAATTTGAAATTGGGAAAGAAGTGGGGCGAGGGCATTTTGGTCATACTTGTTTTGCTAAAGGGAGGAAGGGTGAACTCAAAGACCAACCTGTTGCAGTGAAGATCATTTCCAAGGCCAAGACAAGTGTTATCAATGCATTGCTCTTTGTCCCTATCTCAGGTAGGGTTAGTCACTTTGTTGGTGGTTGATTGTGTGAAGGTGGGGAGCTTCTTGACAGAATCTTGTCAAGGGGAGGAAAGTATTCGGAGGAGGATGCCAAGGTTATAGTTTTGCAGATCCTAAGTGTAGTTGCTTTTTGTCATCTTCAAGGTGTTGTGCACCGTGACCTGAAACCTGAGAATTTCCTCTTCACATCAAGAAGTGAAGATGCTGACATGAAGCTTATTGATTTTGGTCTTTCTGACTTCATCCGTCCAGCTATGCCTTTGCTAATTTACTGTGCTGGGACTGCCTTAAATGGGGATTTGGATGAACGGCTGAATGACATTGTTGGGAGTGCATATTATGTTGCACCTGAGGTTCTTCACAGGTCATATAGTCTGGAAGCAGATATATGGAGTATTGGTGTTATTACCTATATCTTATTATGTGGAAGTCGACCTTTCTGGGCACGAACAGAATCTGGAATTTTTCGTGCAGTGCTTAGAGCTGATCCTAACTTCGATGATTTACCTTGGCCTACTGCCTCTGCCGAGGCCAAGGACTTTGTAAAACGACTCCTAAACAAGGACTACAGGAAAAGGATGACAGCTGTCCAAGCTCTAACTCATCCTTGGTTGAGGGATGACAACCGTCCCATCCCTTTAGATATATTAGTTTATAAACTAGTGAAGGCTTATCTTCATGCAACACCATTCAAGCGTGCAGCAGTGAAGGCCCTTTCAAAAGCCTTGCCCGAGGATGAATTGCCCTACCTTAGGGCACAATTCAGATTGTTGGAACCAAATAGAGATGGGCACATCTCCCTTGACAATTTCAAAATGTTTTTCTTCATGTCTGTGGTGGGCACTGGGGGTGTTAGAGGACTGTCTTTTTTCACATACACAACTTGCTTTTTTGTCTTGTTCATATTTTTGTCCGGATATGGGTGGGCTTTTCCTTGTTTTGAAGGGTTTTGGTTTGTCAGTGCTCCCACCCTGTCTTTTCCTTTATGGTCCATTAATCTCCACGATTCACCTTTGAAGCGAATTTTGCAGGCCCTTGTACGTAATGCAACAGAAGCCATGAGGGAGTCAAGGGTTCTTGAGATCATAAATGCGATGGAGCCACTTGCCTATAGAAAGATGGACTTTGAGGAATTTTGTGCAGCTGCAATTAGCACATATCAATTGGAGGCACATGATAGGTGGGAAGATATTGCCTCAACTGCTTTTGAACATTTTGAGAGAGAAGGCAACCGTTTGATATCGGTTGAAGAATTAGCCAGAGAACTGAATCTTGGGCCTTCCGCTTATTCAATTATCAAAGATTGGATAAGAAATACCGATGGCAAGCTTAGTTTACTTGGATATACAAAATTTTTGCATGGTGTGACTCTTCGTAGTTCAAACCCAAGACACCGATAGTCTTGGGCAATTTGACATATAGTTTGAAGATGCCGGGAAAAAAAATAGATTTAGAGATTTTTTTGTGGATTTTTTTCTTTTTTATTTGAAGGTGGGGCAGAAAAGAATATGTATAAATGAATGTGTTAGCAAGTCAATACAGGGAATGTTGAGTCAATTATATACCAAATCCTTGCTCCTCGGCCTATTTCGTAAATGATATATTGCCATGGGTCAGATCCCATGAATATTCATTAACTTGTGAATGCTTTAAAAGATT 2416 0.4623 MKLIDFGLSDFIRPAMPLLIYCAGTALNGDLDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPTASAEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDDNRPIPLDILVYKLVKAYLHATPFKRAAVKALSKALPEDELPYLRAQFRLLEPNRDGHISLDNFKMFFFMSVVGTGGVRGLSFFTYTTCFFVLFIFLSGYGWAFPCFEGFWFVSAPTLSFPLWSINLHDSPLKRILQALVRNATEAMRESRVLEIINAMEPLAYRKMDFEEFCAAAISTYQLEAHDRWEDIASTAFEHFEREGNRLISVEELARELNLGPSAYSIIKDWIRNTDGKLSLLGYTKFLHGVTLRSSNPRHR 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01665 396 Gene3D - 153 386 - -
Pste6g01665 396 FunFam Calcium-dependent protein kinase SK5 45 140 - -
Pste6g01665 396 Gene3D Transferase(Phosphotransferase) domain 1 1 140 - -
Pste6g01665 396 Pfam Protein kinase domain 1 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01665 396 SUPERFAMILY EF-hand 161 385 IPR011992 -
Pste6g01665 396 Coils Coil 395 396 - -
Pste6g01665 396 SUPERFAMILY Protein kinase-like (PK-like) 2 159 IPR011009 -
Pste6g01665 396 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 371 - -
Pste6g01665 396 SMART serkin_6 1 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01665 396 ProSiteProfiles EF-hand calcium-binding domain profile. 176 211 IPR002048 GO:0005509
Pste6g01665 396 ProSiteProfiles Protein kinase domain profile. 1 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01665 Pste-Chr6 7333127 7340604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01665 269 396 EF-hand Containing Proteins AT2G46700 66.406 7.75e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste6g01665 Pkinase 7.5e-25 CL0016