Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01656 atggggaggcaaccctgctgtgacaaacttggggtgaagaaaggtccatggactgctgaggaagacaagaagctcatcaacttcattctcaccaatggccagtgttgttggcgtgctgtgccaaagcttgctggccttaggcgttgtggcaagagttgtcgccttcgttggactaattatcttcgcccagacttgaagagagggctcctcacagaagcagaagagcaacttgttatcgatctccatgctcgtcttggcaacaggtggtccaaaattgctgctaggttacccggaagaacagacaatgagataaaaaatcattggaacacacatataaagaaaaaactccttaagatgggtattgatcccgttactcatgaacctctcaataaacagacagcatctcaggatagttcaccctccccttcaaagcagcagccacaacctggcaataacttggatctggtaaaggaaactgatggggttctcaactccgaggagaattcaagttcatcccaagctgaaaattcttctggggatgattcacttttgctagatagcatttgcagtgatgagtctctattaaacagcctgtggctggatgaaactcctttagtggaagcattatgggacacaacacctaaaccagagaatactaacaataatacaggtttgttgccatcttgggaggataattatgcttggttattggactgtcaggactttggtattcatgattttgggtttaactgtttcaacgagatagagtcaaatgcattgcaaactataggaatgaaagaagaggggcactag 813 0.0 MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHEPLNKQTASQDSSPSPSKQQPQPGNNLDLVKETDGVLNSEENSSSSQAENSSGDDSLLLDSICSDESLLNSLWLDETPLVEALWDTTPKPENTNNNTGLLPSWEDNYAWLLDCQDFGIHDFGFNCFNEIESNALQTIGMKEEGH 270
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01656 270 MobiDBLite consensus disorder prediction 128 153 - -
Pste6g01656 270 FunFam MYB transcription factor 70 146 - -
Pste6g01656 270 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pste6g01656 270 FunFam MYB transcription factor 11 67 - -
Pste6g01656 270 CDD SANT 16 61 IPR001005 -
Pste6g01656 270 MobiDBLite consensus disorder prediction 127 156 - -
Pste6g01656 270 Gene3D - 12 67 - -
Pste6g01656 270 MobiDBLite consensus disorder prediction 161 180 - -
Pste6g01656 270 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pste6g01656 270 Gene3D - 71 148 - -
Pste6g01656 270 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste6g01656 270 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Pste6g01656 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pste6g01656 270 CDD SANT 71 112 IPR001005 -
Pste6g01656 270 SMART sant 13 63 IPR001005 -
Pste6g01656 270 SMART sant 66 114 IPR001005 -
Pste6g01656 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pste6g01656 270 PANTHER F14D16.11-RELATED 1 171 - -
Pste6g01656 270 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pste6g01656 270 MobiDBLite consensus disorder prediction 162 180 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste6g01656 Pste-Chr6 7258345 7260111 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01656 1 249 MYB Transcription Factor Family AT4G22680 60.526 1.56e-102 298
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste6g01656 Myb_DNA-binding 2.8e-13 CL0123