Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01641 GAGGAGGACAAGTTAACTGTAGCATTGCCAAACTGTGTTGTTGTGTACTTGTTAAAATAACAACAAAGACTGAACCGGAGCTCCATAAGTGTTGGTCTTGGTTCTCCTTGTTTTTCCTTCTGTCTATTTCCCCGAGACAAGGTTAAAGGAGGTTGAAGTTGAACCACTCGTTTCTGTCTTCCACACAAATTATTTTCTGGCTCCTTCTGAGGGCTCTTTTTAGTGGTTCAAGCTGTAAATGCTGCCTCTGAGATAGATTTTACATGGGGAAGAAGGGAAGTGGTAGTTCATGGTTAACCGCTGTCAAAAGGGCATTCAGATCTCCCACCAAAGACACTGACAAAAGAAGTGGCAGAAGAAGAGAAGACTGTGATCAAGAAGAAGATGAAGAGAAGAAGAGGGAAAAGAGGAGATGGATTTTCAGGAAGACTCACATGAGTCATGAAGGAGTGAGCAACAACACTGCTCAACAAAAGTTAAAACATGATGTCTCAGCAAGTCGGGGTTCAAGTACAGACCAGGATAAACAACATGCACTTGCCGTGGCGGTGGCCACCGCAGAAGCCGCCATGGCCACCGCTCAGGCAGCGGTTGAAGTGGCAAGGTTGACCAAACCTGCTAGCCATGCCAGGGAGCATTATGCCGCTGTTGTTATACAAACTGCTTTTAGAGGGTATCTGGCAAGAAGAGCACTTCGTGCACTAAAGGGTTTGGTGAAGTTGCAAGCTTTGGTTAGGGGTCACAATGTGAGGAAGCAGGCAAAGATGACCCTCCGGTGCATGCAGGCTTTGGTTAGAGTTCAAGCAAGGGTCCTTGACCAGCGCATAAGGTCTTCACTTGAAGGTAGTAGAAAATCCACTTTCAGTGACACTACTAGTGTTTGGGACTCGCGGTATCTTCAGGACATTTCAGATAGGAAATCAATAGAAAGCAAAAAGTACTTTTTGGTTGCAAAAGAGCAGAGGAATAGTCCTCAATCTCAAATTCTTGATCAATCAAGAGAGGGAAGCAGCATTGCAAATGACTGGGATGAACGTCCTCACACAGTTGAAGAAGTGAAGGCCATGTTGCAGCAGAGGAAGGAAGCTGCAATGAAGAGGGACAAGACCTTATCCCAAGCCTTTTCCCAACAGGTTTTGATCCCTCTTCAAATTTGGAGGAATGGTAGGACATCATCAATTGGAAACGAAGATGAGCTGGAAGAGAGACCAAAGTGGCTAGATCGGTGGATGGCCACAAAGCCATGGGAGAATACAGGAAGGGCTTCAACTGATCAAAGAGATCCCATTAAGACTGTGGAGATTGACACTTCTCAGCCTTATTCTTATCTAGGAACCAATTACAGAAGATCACATCCAAATTATCAATATAACCCAAACCATCACCAACCACAAAGGCATTCCATTGCTTCCCCACTCCATAGATCTCACCAATCCCCTGCAACCCCTTCTCCTGCCAAATCAAGGCCAATCCAAGTCAGGTCTGCAAGCCCACGTTGTGTCAGAGAAGACAGAAGCTACCACACTTCCCAAACACCAAGCTTGAGGTCTAATTACCAGTATACAGGACATTTATACCAAAATGGAAAAGTTGTTGGAACTGGAACTAGTAGTGCTGGTGCCGCATTGCCTAATTACATGGCCGCAACAGAGTCTGCCAAGGCTCGAATTCGGTCACAAAGCGCACCCAGGCAGAGGCCATCCACACCAGAGAGGGACAGAGCCGGATCAGCAAAGAAAAGGCTTTCATTTCCTGCTCCTGACCCTTATAGTGTGGGAGTGAGCTATGGAAATTATGGACATAGTTTAAGGAGTCCAAGCTTCAAGAGTGTGAGTGGATCACACTTTGGGTTAGAGCAACAGTCCAACTACTCCTCTTGCTGCACTGAGAGTATTGGTGGTGGCGAGGTTTCTCCTTCTTCAACTGGTGACCTTAGGAGGTGGTTGAGATGATTTCTTGCGTCCTTTAATGAGAAGAAACATGACCGGACCCATTAGGCCTTGTCCATTCACTTCTTTATTTCATTTTATTTGGGCTTTTGTGATGTTAGAGTTAATTTTAGTTTAACCCTTTCTCACCCCAAAAGAAAGTTACCATGGGTGACCTGAATCTGATGTTAGAGGCAGAAAAGCAAGTACTTTTCTTGCTAGGAAAACTCAAGAACAGTTTAATGTGTTAGTTTATCATTCGTTTTTCATACTTTTGTTAAGAATTAAGATGCCAAGATAAAAGGGAGCCGTATGTGGTGGCCTACCTCACTTGGGATGTTGTGTTGATGTTGAAAGAATTGCCTAGACCATCTGACTAGCTTTTAATGGACTGTCCTGTTACAGTAACATGTAATATTTCGTATTTTAGCCATTTCTTTTAGTTAGCAAAATGTACAACCCCC 2392 0.4448 MGKKGSGSSWLTAVKRAFRSPTKDTDKRSGRRREDCDQEEDEEKKREKRRWIFRKTHMSHEGVSNNTAQQKLKHDVSASRGSSTDQDKQHALAVAVATAEAAMATAQAAVEVARLTKPASHAREHYAAVVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSLEGSRKSTFSDTTSVWDSRYLQDISDRKSIESKKYFLVAKEQRNSPQSQILDQSREGSSIANDWDERPHTVEEVKAMLQQRKEAAMKRDKTLSQAFSQQVLIPLQIWRNGRTSSIGNEDELEERPKWLDRWMATKPWENTGRASTDQRDPIKTVEIDTSQPYSYLGTNYRRSHPNYQYNPNHHQPQRHSIASPLHRSHQSPATPSPAKSRPIQVRSASPRCVREDRSYHTSQTPSLRSNYQYTGHLYQNGKVVGTGTSSAGAALPNYMAATESAKARIRSQSAPRQRPSTPERDRAGSAKKRLSFPAPDPYSVGVSYGNYGHSLRSPSFKSVSGSHFGLEQQSNYSSCCTESIGGGEVSPSSTGDLRRWLR 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01641 562 ProSiteProfiles IQ motif profile. 148 175 IPR000048 GO:0005515
Pste6g01641 562 ProSiteProfiles IQ motif profile. 124 152 IPR000048 GO:0005515
Pste6g01641 562 MobiDBLite consensus disorder prediction 522 550 - -
Pste6g01641 562 Pfam Protein of unknown function (DUF4005) 409 511 IPR025064 -
Pste6g01641 562 Gene3D - 121 175 - -
Pste6g01641 562 FunFam IQ-domain 11 123 174 - -
Pste6g01641 562 Pfam IQ calmodulin-binding motif 127 145 IPR000048 GO:0005515
Pste6g01641 562 Pfam IQ calmodulin-binding motif 151 167 IPR000048 GO:0005515
Pste6g01641 562 SMART iq_5 123 145 IPR000048 GO:0005515
Pste6g01641 562 SMART iq_5 146 167 IPR000048 GO:0005515
Pste6g01641 562 MobiDBLite consensus disorder prediction 522 562 - -
Pste6g01641 562 MobiDBLite consensus disorder prediction 345 403 - -
Pste6g01641 562 PANTHER IQ-DOMAIN 5-RELATED 1 498 - -
Pste6g01641 562 MobiDBLite consensus disorder prediction 19 57 - -
Pste6g01641 562 MobiDBLite consensus disorder prediction 330 430 - -
Pste6g01641 562 MobiDBLite consensus disorder prediction 1 87 - -
Pste6g01641 562 MobiDBLite consensus disorder prediction 59 87 - -
Pste6g01641 562 MobiDBLite consensus disorder prediction 464 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01641 Pste-Chr6 7156043 7159028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01641 10 562 IQD Protein Family AT4G00820 57.019 3.96e-176 506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01641 6 7156043 7159028 Pste6g01641 6 7156043 7159028 ECH