Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01631 TGTACCCATTTTGAATGCATTCTCTCTCTTTTCTTTGGGTCCCCGGTGAATCTACAACCACACTCTCTAGCTAGTTTCTGTTCTTGCTAGCTAGCTATCATCGATCACTCTCTTTAGTTAACCACCTGAATGCCGGAAAACATGAGCATATCTGTCAATGGACAATCTCAAGTCCCACCTGGCTTCAGGTTTCATCCAACTGAAGAGGAGCTTCTTCAGTACTACTTGAGGAAGAAGGTCTCTTACGAGAAGATTGACCTCGATGTCATTCGTGACGTTGATCTCAACAAGCTAGAGCCATGGGACATTCAAGAGAAATGCAAAATAGGAACCACTCCACAGAATGATTGGTACTTCTTCAGCCACAAAGACAAGAAGTACCCCACAGGAACACGCACCAATCGCGCCACTGCTGCAGGGTTCTGGAAAGCCACTGGCCGTGACAAAGTGATATACAGCAACGGGAAGAGGATTGGAATGAGAAAGACTCTGGTTTTCTACAAAGGAAGAGCCCCACACGGCCAGAAGTCCGATTGGATCATGCATGAATACAGACTAGACGACAACAACACCAACGACACCAATATTGTGTCGAATGTGATGGGAGATGCTGCTCAAGAAGAAGGATGGGTGGTGTGTAGGATATTCAAGAAGAAGAACCATCTGAAAACCCTAGACAGCCCGTTGGCTTCTAGTGAAGGTAGAAGGAGCCACTTGTTTGACTCGTGTGATGAGGGAGCATTGGAGCAAATACTTCAGCAAATGGGAAGGGGTTGCAAGGAAGAGAACAGCTATGAAGGGAACTACAGCTATGGAAGGTTTGCAAGGCCTTATGAGACAGGCCTGAACAATGGTGGAGGAGGATACAATGACAGGTTCATGAAGTTGCCAAGCTTGGAGAGTCCAAAATCAACAAGCATAGAGAGCCACAATAATAATAATAGTAATAATAATAATAATAATAATAATAATGGTGATAACAATGAGCACAATAATGGGTATCATCCCATAATTCCAGTAGAGATGGGCACAGACAATGAAGGGTCATTCACAAACCACCAGCAGCACCAGGTGAGTGGTGGTGACCCCAACATGGTTCACCCATTGGAGGCAGCATCATCATCTTTGGTGGTAGGATCAGGTGGTGGAGGCCTCACCAACTGGGCTGCGTTGGACCGTTTAGTTGCATCTCAGCTCAATGGCCAGACCGAGGCCTCTAGGCAACTGGCATGTTTCAATGACCCCACCATGGCCTACTGCACCAGCGACCATGATCTTCAACTACCCACCCTCCGATCCTCATCAACTCCTTCATCAACGTCAGCACACACCAGACCTTCCCCTGCACCCGCATACATGAATCCCACCCAGGACTTCACCAGCGAGATTGACCTTTGGAACTTCACCCGATCCACGTCCTCCTTGCTGTCATCCTCCGAACCACTATGCCACGTATCCAACACGTCAGTGTAG 1473 0.4745 MPENMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNNTNDTNIVSNVMGDAAQEEGWVVCRIFKKKNHLKTLDSPLASSEGRRSHLFDSCDEGALEQILQQMGRGCKEENSYEGNYSYGRFARPYETGLNNGGGGYNDRFMKLPSLESPKSTSIESHNNNNSNNNNNNNNNGDNNEHNNGYHPIIPVEMGTDNEGSFTNHQQHQVSGGDPNMVHPLEAASSSLVVGSGGGGLTNWAALDRLVASQLNGQTEASRQLACFNDPTMAYCTSDHDLQLPTLRSSSTPSSTSAHTRPSPAPAYMNPTQDFTSEIDLWNFTRSTSSLLSSSEPLCHVSNTSV 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01631 447 MobiDBLite consensus disorder prediction 256 288 - -
Pste6g01631 447 FunFam NAC domain-containing protein 24 179 - -
Pste6g01631 447 MobiDBLite consensus disorder prediction 250 324 - -
Pste6g01631 447 ProSiteProfiles NAC domain profile. 15 175 IPR003441 GO:0003677|GO:0006355
Pste6g01631 447 MobiDBLite consensus disorder prediction 387 413 - -
Pste6g01631 447 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 284 - -
Pste6g01631 447 SUPERFAMILY NAC domain 9 175 IPR036093 GO:0003677|GO:0006355
Pste6g01631 447 Gene3D NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
Pste6g01631 447 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Pste6g01631 447 MobiDBLite consensus disorder prediction 302 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01631 Pste-Chr6 7096299 7098526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01631 1 446 NAC Transcription Factor Family AT2G46770 52.723 1.05e-136 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste6g01631 NAM 4.4e-36 No_clan