Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01629 CTAACCCTTCTTTCTTTCTCATTCCGACGCTTCCGATTCCAAATTCTCAACATGACAGAATCTGAGGAAAGAGCCACGCTGACGTGGCGCAAAATCCCCATCCCCAAACGCTCCCCCAACGACGTCGTTCTCAAACCGCTCCGAAACGACGCCGTCTTGGCCTCCGCCAGTGGCATCCGCTGTAAATTCGCCAGCGTGTCGGTGGCAGAAAGGAAATTCGACCTCGAATTGGCGCCCACGCCGACGCAGTTTCTGCAGCACCCGCTCGCGGTGGTCGCATTGGTGCCCAAAGACCTCGCCCTGTTCCTCGCCGGAGCCATCGCCGGCGCCGCCGCGAAGTCCGTCACCGCCCCCCTCGACCGCATCAAGCTCCTCATGCAGACTCACGGCGTGCGAGTTGGACACGAAAGTGCGAAGAAAGCGATTGGTTTCGTTGAGGCCATAACTGTAATAGGGAAGCAAGAAGGCATTAAAGGTTATTGGAAGGGCAACCTCCCCCAGGTGATTCGGGTTATACCTTACAGTGCTGTCCAGCTTTTTGCTTATGAATTTTACAAGAAAATATTCAAGGGAAAGGATGGTGAACTCTCTGTTGTGGGAAGACTTGCAGCAGGTGCTTTTGCTGGCATGACATCAACTTTTATAACCTACCCATTAGATGTCCTGAGATTACGATTAGCAGTTGAACCTGGTTATCGAACAATGTCGCAGGTTGCCTTGAGCATGCTAAGAGAGGAAGGATTTGCATCTTTCTACTATGGCCTTGGGCCTTCTCTGATTGGAATAGCTCCATATATTGCAGTGAACTTTTGTGTTTTTGATTTATTAAAGAAGTCCTTGCCAGAGAAATATCAAAAGAGAACTGAAACGTCTCTACTCACTGCCGTGCTTTCAGCATCTCTTGCCACACTTACATGCTATCCTCTGGACACTGTGCGAAGACAGATGCAATTGAAGGCTACACCTTATAAGACAGTAATTGATGCCATTTCAGGTATTGTGGCATGGGATGGAGTTATTGGCTTGTATCGGGGATTCGTGCCTAATGCTTTGAAAAACCTACCAAACAGCAGTATCAGGCTTACTACATATGACATTGTCAAACGCCTAATTGCAGCTAGTGAGAAAGAGTTTCAAACAATTACAGAGGAAAACCGCAACAAACGAAAGAAACCCCAGTAGTCAATGACAGTGAACATAGGATTTATATTGTTGTAGTCATTCTTTTCCCGCTGGAATTTTGTGGAACTAATGCTTCTGTAAATCTCTCCAGTATTTGTGGGAATTGATTGTAAGATACCCAAACTGTCAACAGTTATGAGTATATACCAGCCAGCCAATATATGGTATCTCGGGACTATAAATTTTACAGGACACAATGTGCTAGTTACTGTAATGCCGTATTCTTTTTCAGTATGTATTTTAGCTGTCATTTTTTGTAGGGATTTTGTCAAAATGAATGGCAATATAAAGAGATGTCAATGAAAATACTGTGACATACTTTGCCAACACACTATCATAGGATGAATTTTATGTACGAGGA 1543 0.453 MTESEERATLTWRKIPIPKRSPNDVVLKPLRNDAVLASASGIRCKFASVSVAERKFDLELAPTPTQFLQHPLAVVALVPKDLALFLAGAIAGAAAKSVTAPLDRIKLLMQTHGVRVGHESAKKAIGFVEAITVIGKQEGIKGYWKGNLPQVIRVIPYSAVQLFAYEFYKKIFKGKDGELSVVGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSQVALSMLREEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTETSLLTAVLSASLATLTCYPLDTVRRQMQLKATPYKTVIDAISGIVAWDGVIGLYRGFVPNALKNLPNSSIRLTTYDIVKRLIAASEKEFQTITEENRNKRKKPQ 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01629 376 SUPERFAMILY Mitochondrial carrier 82 349 IPR023395 -
Pste6g01629 376 PRINTS Mitochondrial carrier protein signature 235 253 IPR002067 GO:0055085
Pste6g01629 376 PRINTS Mitochondrial carrier protein signature 194 212 IPR002067 GO:0055085
Pste6g01629 376 PRINTS Mitochondrial carrier protein signature 84 97 IPR002067 GO:0055085
Pste6g01629 376 PRINTS Mitochondrial carrier protein signature 278 300 IPR002067 GO:0055085
Pste6g01629 376 PRINTS Mitochondrial carrier protein signature 97 111 IPR002067 GO:0055085
Pste6g01629 376 PRINTS Mitochondrial carrier protein signature 146 166 IPR002067 GO:0055085
Pste6g01629 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 79 171 IPR018108 -
Pste6g01629 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 179 262 IPR018108 -
Pste6g01629 376 Gene3D Mitochondrial carrier domain 81 354 IPR023395 -
Pste6g01629 376 Pfam Mitochondrial carrier protein 273 355 IPR018108 -
Pste6g01629 376 Pfam Mitochondrial carrier protein 178 265 IPR018108 -
Pste6g01629 376 Pfam Mitochondrial carrier protein 84 174 IPR018108 -
Pste6g01629 376 Coils Coil 354 374 - -
Pste6g01629 376 PANTHER SOLUTE CARRIER FAMILY 25 80 354 - -
Pste6g01629 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 269 353 IPR018108 -
Pste6g01629 376 FunFam Envelope ADP,ATP carrier protein 81 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01629 Pste-Chr6 7087616 7092971 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01629 5 371 Organic Solute Cotransporters AT3G51870 68.325 0.0 513