Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01611 CATCACAGATTATCCAATATCCCCTTGTTAGTTCAATATATCTCCCATCCCTCTCTCTCACACCAACCATTAACTCCCTTCTCACCTTAATTCCCAACCCCGGCGCACGTTAGCAAACTCCAATGGCCACAGCAACTGCGGCAGCAACCTCTTCTTTTATTGGAACGCGTCTCATTGAGGCGGGTTTCAGTTCGGGCCGGGTACAGGCCCGATTTGGGTTTGGAAAGAAAAAGGCTGCACCAAAAAAGGTGTCCAAGGGATCCGGTTTTCAATCAGACAGACCATTGTGGTATCCTGGGGCGAAGGCTCCAGAATACCTGGATGGTAGTCTGGTTGGAGACTACGGATTCGATCCGTTTGGGCTTGGGAAGCCCGCGGAGTATTTGCAGTTCGAGCTGGACTCGCTGGACCAGAACCTGGCGAAGAACGTGGCGGGGGACATCATCGGTACGAGGACGGAGTTTGCTGACGTGAAATCAACTCCGTTCCAACCCTACACCGAGGTTTTCGGGCTTCAGAGGTTCCGTGAGTGCGAACTCATTCATGGACGCTGGGCCATGCTCGCCACGCTCGGGGCTCTCTCCGTTGAGTTGCTCACTGGGGTTACGTGGCAGGACGCTGGCAAGGTGGAGCTAGTGGAAGGGTCATCATACCTTGGGCAACCACTTCCATTCTCAATCACCACATTGATTTGGATCGAGGTTCTCCTAATTGGATATATAGAATTCCAGAGGAACGCAGAACTTGACCCAGAAAAGAGGCTCTACCCAGGTGGAAGCTACTTCGACCCACTGGGCCTGGCCTCAGACCCAGAGAAGAAAGCCCGGCTTCAATTGGCAGAGATCAAGCACGCACGTCTTGCAATGGTGGGCTTCTTGGGCTTTGCAGTTCAAGCTGCAGCCACTGGCAAGGGCCCACTCAACAACTGGGCCACCCATTTGAGTGACCCACTTCACACTACCATCATTGACACCTTCTCATCCTCTTAAGTAATTAAGAAGAGTCTTGTACCTTATTACTATATGTAAACGTCTTTCGGCTTTGGGTTGTAATTAATTGAACATTTCACTTAGCTGGATTAGTACTTGTGAAAACTTGAAACGTGAATTGGAGAGGCTAAGCAGAATGCTTCTGCTTGATGATAAGTCTTATGTGAATGTTAATTAACCATGAAATCGAGAGGTAAGAACAAGGACCCAAAAATATTTACTTATAAAATTGAGATTAATATGAAAGGTAATGGAGGAAATTGGATTGAGGAGATTTTAATTTATTCATTTACTAAAGTTGGTAGGTAAGGCTTTTTCTAGACTTATAGGAAATTAGGAATAAGTGGGTTATTTGTATTTACAGTTACTTTTTATTAATATTATGTTGACTATAATTTATTAATAACTTTTAAATAAATTAGCTTGCTACA 1420 0.457 MATATAAATSSFIGTRLIEAGFSSGRVQARFGFGKKKAAPKKVSKGSGFQSDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDIIGTRTEFADVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVELLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLLIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKARLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01611 288 FunFam Chlorophyll a-b binding protein, chloroplastic 104 287 - -
Pste6g01611 288 Pfam Chlorophyll A-B binding protein 62 258 IPR022796 -
Pste6g01611 288 Gene3D Chlorophyll a/b binding protein domain 56 288 - -
Pste6g01611 288 SUPERFAMILY Chlorophyll a-b binding protein 51 286 - -
Pste6g01611 288 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 5 284 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01611 Pste-Chr6 7003489 7005551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01611 12 288 Chloroplast and Mitochondria Gene Families AT3G08940 83.813 2.58e-173 478