Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01606 ATGGTGGGTGGTAAAATCAATGCGAGGCAACTTAATAATGACACAACGTTTACCAAAATCTTTGTTGGAGGGTTGGCTTGGGAGACTCAAAGGGACACGATGAGGAGGTATTTTGAGCAGTTTGGAGAGATCTTAGAGGCTGTTATTATCACAGACAAGAACACTGGGAGATCCAAGGGTTATGGTTTTGTCACATTCAAGGATCCAGAGGCAGCAATGAAAGCATGTGAGAACCCGTCTCCAATAATTGATGGGAGAAGGGCAAACTGTAATATTGCATCTATTGGTGCAAACAATAATCGCACACAGGCTCCACAACATGGTCTCAATATGTCCATTTTCCTTTATCTCATTACAATGTCCTCTTTCCATTTTTCCAATTCCAATTTGTTTTCCTGTATTCTATTTTCTGCAAATAGTTTAGTTTTAGTATTCTCACGTTTCTGCATTGAATTATCTCGTTTTCTCATGCATAGTCAGCAAAACTATTATGGGATGCTTGGAGGTCAACAGTTCTTAACATACTACCCCTCCAATGGGGTATCTGGGACAGTGGGACTGGTCAATAACATTTACCCTTTTAGTTCCCAATATCCATACAATAGTCAGCATCAGGGTTTTGGAATTCAATATCCCCAAATGATGCAGTTTCCAATTCTCCCTAGGCACTTTGGCTCAGCTGGTATCCTTACAGTTTCTTCTTCAATGGCAATGCCATCTTTTAGTGCAGTTACAACAACAACAACAGAGGGGATAGGAACAAGAGCATATGCTTCACAAACCGCTGGAACAACTTCTGAACAAAATTCTTCA 813 0.4047 MVGGKINARQLNNDTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVIITDKNTGRSKGYGFVTFKDPEAAMKACENPSPIIDGRRANCNIASIGANNNRTQAPQHGLNMSIFLYLITMSSFHFSNSNLFSCILFSANSLVLVFSRFCIELSRFLMHSQQNYYGMLGGQQFLTYYPSNGVSGTVGLVNNIYPFSSQYPYNSQHQGFGIQYPQMMQFPILPRHFGSAGILTVSSSMAMPSFSAVTTTTTEGIGTRAYASQTAGTTSEQNSS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01606 271 SMART rrm1_1 19 91 IPR000504 GO:0003723
Pste6g01606 271 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 18 95 IPR000504 GO:0003723
Pste6g01606 271 PANTHER BOULE-RELATED 12 260 - -
Pste6g01606 271 SUPERFAMILY RNA-binding domain, RBD 17 105 IPR035979 GO:0003676
Pste6g01606 271 Gene3D - 5 108 IPR012677 -
Pste6g01606 271 CDD RRM_RBM24_RBM38_like 18 93 - -
Pste6g01606 271 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 20 77 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01606 Pste-Chr6 6988744 6990725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01606 12 94 C2H2 Transcription Factor Family AT2G19380 40.964 1.64e-15 74.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01606 6 6988744 6990725 Pste6g01606 6 6988744 6990725 ECH