Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01595 CATCACAGATTATCCAATATCCCCTTGTTAGTTCAATATATCTCCCATCCCTCTCTCTCACACCAACCATTAACTCCCTTCTCACCTTAATTCCCAACCCCGGCGCACGTTAGCAAACTCCAATGGCCACAGCAACTGCGGCAGCAACCTCTTCTTTTATTGGAACGCGTCTCATTGAGGCGGGTTTCAGTTCGGGCCGGGTACAGGCCCGATTTGGGTTTGGAAAGAAAAGGCTGCACCAAAAGGTGTCCAAGGGATCCGGTTTTCAATCAGACAGACCATTGTGGTATCCTGGGGCGAAGGCTCCAGAATACCTGGATGGTAGTCTGGTTGGAGACTACGGATTCGATCCGTTTGGGCTTGGGAAGCCCGCGGAGTATTTGCAGTTCGAGCTGGACTCGCTGGACCAGAACCTGGCGAAGAACGTGGCGGGGGACATCATCGGTACGAGGACGGAGTTTGCTGACGTGAAATCAACTCCGTTCCAACCCTACACCGAGGTTTTCGGGCTTCAGAGGTTCCGTGAGTGCGAACTCATTCATGGACGCTGGGCCATGCTCGCCACGCTCAGGGCTCTCTCCGTTGAGTTGCTCACTGGGGTTACGTGGCAGGACGCTGGCAAGGTGGAGCTAGTGGAAGGGTCATCATACCTTGGGCAACCACTTCCATTCTCAATCACCACATTGATTTGGATCGAGGTTCTCCTAATTGGATATATAGAATTCCAGAGGAACGCAGAACTTGACCCAGAAAAGAGGCTCTACCCAGGTGGAAGCTACTTCGACCCACTGGGCCTGGCCTCAGACCCAGAGAAGAAAGCCCGGCTTCAATTGGCAGAGATCAAGCACGCACGTCTTGCCATGGTGGGCTTCTTGGGCTTTGCAGTTCAAGCTGCAGCCACTGGCAAGGGCCCACTCAACAACTGGGCCACCCATTTGAGTGACCCACTTCACACTACCATCATTGACACCTTCTCATCCTCTTAAGTAATTAAGAAGAGTCTTGTACCTTATTACTATATGTAAACGTCTTTCGGCTTTGGGTTGTAATTAATTGAACATTTCACTTAGCTGGATTAGTACTTGTGAAAACTTGAAACGTGAATTGGAGAGGCTAAGCAGAATGCTTCTGCTTGATGATAAGTCTTATGTGAATGTTAATTAACCATGAAATCGAGAGGTAAGAACAAGGGCCCAAAAAAATTTACTTATAAAATTGAGATTAATATGAAAGGTAATGGAGGAAATTGGATTGAGGAGATTTTAATTTATTCATTTACTAAAGTTGGTAGGTAAGGCTTTTTCTAGACTTATAGGAAATTAGGAATAAGTGGGTTATTTGTATTTACAGTTACTTTTTATTAATATTATGTTGACTATAATTTATTAATAACTTTTTAAATAAATTAGCTTGCTACA 1418 0.4584 MATATAAATSSFIGTRLIEAGFSSGRVQARFGFGKKRLHQKVSKGSGFQSDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDIIGTRTEFADVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLRALSVELLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLLIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKARLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01595 287 Gene3D Chlorophyll a/b binding protein domain 55 287 - -
Pste6g01595 287 Pfam Chlorophyll A-B binding protein 61 257 IPR022796 -
Pste6g01595 287 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 5 283 IPR001344 GO:0009765|GO:0016020
Pste6g01595 287 SUPERFAMILY Chlorophyll a-b binding protein 50 285 - -
Pste6g01595 287 FunFam Chlorophyll a-b binding protein, chloroplastic 103 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01595 Pste-Chr6 6947968 6950030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01595 12 287 Chloroplast and Mitochondria Gene Families AT3G08940 82.671 3.21e-169 468