Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01587 ATGCCATACAATATTTGCTCTGACCCCAAACAAACAAATTTTAATCAATTTAAGAGTCTACATCTAAAGAAGATCCAAAATATGTCATATGCAATAAGAGGAATTCTTCAAAGAGACTGTTATAACCAATTGGGATTGTATAGCAATAGTAAATTATTGCAGCCTCTTTTTTCAACACCATCTGCTGAAGTAAACAACCCCACTTGGGATTCTCACGAACCCAAAAAATTATCTGGAATTACTACTGAAAATTGTGATCAGTATGGTGGCTCAAATCAGAACCCAGAGAATATGATCAACACAGTGATTGGTCAGTATGGACTTGGGCCAAAATTAGCAAACAGCCAATGTGGACTCTTACCTGTTTCAGGGTTTATTTCGGATCTTAGGTCCAAGGAACATGGTCATGTTTTTACTCCTGTGTTCTATGCACAATCTGGCATTCAGCCAATCTGGAGTTCAAAACCAGTTTGCCAGCATGAGAGTTCCCCCTTTCCCACAAGTACCTCCTCCCAGTCCTATCCTGAAAGTCACAAATCAGATCAACATCATGATTGTTCCTATGTTGCTACTTGTCTTAATCAAAATGTAAAGGATGAAACCAATTTGGATCATGCAAGGCATGATTCTCCTACTGCTGATCAGTGTGCTGGTAACAGTTTATGCCATGATGCTGCAAATCATGTTAATAATAGTGCATTTAGAAGCGTGGACAGTGGAAATGATGGAAATGCTACTTCAGCTATGGTATCTAAGAGCTATCCAGAAGGTTTCAGTGATAGTGACTGTCCTAATTATGATGGATTTAGAGTGGCAGATTCTCATCACGCCAGTCAAAGAGAAGCAGCTCTGTCCAAGTTTCGACTGAAGCGGAAAGAGAGATGCTTTGAGAAAAAGGTTCGATATCAAAGCCGGAAAAGACTGGCAGAGCTGCGGCCTAGGGTAAAAGGGCAGTTTGTACGCCAAGTACACAATGATCATCCAGTCACTGAGATTGTTGGTGATCCATGAAATTTGTTCTTTTTAGATTACCTGTAGTATTAAATTACAGCTGACTTCAACACTGACAGTGCCAACTAGGATTGGCATTAGGGTGGTGTGTATGTTGGTGGAATCTGTTTATCTTGAAGTTTTAAGCGAAAGAGTAAGCCAGTAGGGAGATAGCTAAAGGGTAATGTTAAGCATTCTTAGGTGTTTTCTTCTAGCTTTATATCGGACTGCCACTTACAAATTTAGGACTGTGATTATTTAGTGGGATTGGTTTTGGTTTAACTTGTGTATATGTTTTTTTTGGTTGAATACTAATATGGGTCTGTAATTACATAGATTGTAGGTTTGAGTTTGAAAAAATCCCGTCGGGAACTTATGGTTTTGCAATTGAACGATCTTTCTTTACATTGGGCATTTGAGCATTGTGTAAAACTCAGATCACATATTTGGAACATCTATTTCAATTCACAATTGTTGCTGATATTGTTCATAGCAA 1486 0.3856 MPYNICSDPKQTNFNQFKSLHLKKIQNMSYAIRGILQRDCYNQLGLYSNSKLLQPLFSTPSAEVNNPTWDSHEPKKLSGITTENCDQYGGSNQNPENMINTVIGQYGLGPKLANSQCGLLPVSGFISDLRSKEHGHVFTPVFYAQSGIQPIWSSKPVCQHESSPFPTSTSSQSYPESHKSDQHHDCSYVATCLNQNVKDETNLDHARHDSPTADQCAGNSLCHDAANHVNNSAFRSVDSGNDGNATSAMVSKSYPEGFSDSDCPNYDGFRVADSHHASQREAALSKFRLKRKERCFEKKVRYQSRKRLAELRPRVKGQFVRQVHNDHPVTEIVGDP 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01587 336 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 155 322 IPR045281 GO:0009909
Pste6g01587 336 MobiDBLite consensus disorder prediction 159 176 - -
Pste6g01587 336 ProSiteProfiles CCT domain profile. 280 322 IPR010402 GO:0005515
Pste6g01587 336 MobiDBLite consensus disorder prediction 159 182 - -
Pste6g01587 336 Pfam CCT motif 280 322 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01587 Pste-Chr6 6919554 6921630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01587 278 326 Response Regulator Gene Family AT2G46790 83.673 6.58e-21 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste6g01587 CCT 1.4e-16 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01587 6 6919554 6921630 Pste6g01587 6 6919554 6921630 ECH