Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01577 ATGATGACCCAAAGGTTGCATGAAAATATAGTGTTGGAGGTTGAGAAGGTTTCCCTTGGCGTAGAATTGGGGAAGTCGTGTGATTCTTTGAATGCCAAAGAAAATGACTGGCTAAAGGAGGTGGAGAGGAGGATGGTCGCAGAGAAGGAGGTCACCAAATTGAAGGCGGAGAGGGATGCAGGGGATACTATAAAGGATAGACACATCATCATAGAGGATGCAAGATCTGCTAATGCTCCAGAGCTGGATGCTGGCTCTATTGAAGGTGCAGAAATTGTTCAGATAGATGAGGTTGTCGAGGAAATTGTTCAGCCTGAGATGGAGGCACAAAGCTCTCAGCATACGCAAGTTATTGAGATCAGTAGAGATTGTGTTGATGGTGGAAGGAAGATTTGTGGGGAAGCACCATGTGGATTTGCAGAAGCTGGATCCATCTCCAAGGATTCTGAAGAAAGATCAACTTCTATGCGAAAGCTTTTCATGGCAGTGGTCCTTTGTGTTATTTTCATGACAGTTGAAGTGGTGGGTGGCATCAAAGCTAACAGTCTTGCTATATTGACTGATGCAGCTCATTTACTTTCAGATGTTGCAGCCTTTGCCATCTCCTTATTTTCTTTATGGGCTGCTGGATGGGAAGCTACACCTCGTCAGTCATATGGATTTTTCCGAATAGAGATTCTTGGTGCTTTGGTCTCTATCCAATTAATATGGTTGCTTGCTGGGATTCTGGTATATGAAGCCATTGAAAGAATCATTGCCGGTCCTAAAAATGTGGATGGTTTTTTAATGTTTTTAGTTTCTGCATTCGGTCTGGTGGTTAATATCATCATGGCTTTGTTATTGGGTCATGATCATGGCCATGGACATCATGGTCATGGTCACGGACACGATGGTCATGGTCATGGACACGATGGTCATGGCCACAGTCATGGATTTACAGTGTCTACCCATCATGATGGAAGGCATACAAAAGATGAGCACCATGACACACATGATGATCACGCACACCATCATGATGAAAAGCATCCAAAAGATGTTCACAAAGAGGTTATTGAACCTCTTCTTGGTGAATCAAAGGGTGGAACTAAGAAGAAGAAGCAACGGAACATAAATGTACAGGGGGCTTATCTCCATGTTCTTGGGGATTCTATCCAGAGTATTGGGGTAATGATTGGGGGAGGAGTCATATGGTATAAGCCTGATTGGAAAATAGTTGATTTAATTTGCACTCTAATCTTTTCAGTAATTGTTTTGGGGACAACTATCAATATGCTGCGAAACATTTTGGAGGTCCTGATGGAGAGCACTCCTCGTGAGATAGATGCTACCAAGCTTGAAAGGGGGCTGTTGGATATGGAAGATGTAGTGGCTGTTCATGAACTGCATATATGGGCCATTACAGTGGGAAAGGTTTTGCTTGCTTGTCATGTTAAAATCAGACGTGAAGCAGATGCAGACATGGTGCTGGACAAGGTTATAGACTATATCAAAAGGGTCTATAACATCAGTCATGTAACTATACAGATAGAGCGTTAG 1536 0.4297 MMTQRLHENIVLEVEKVSLGVELGKSCDSLNAKENDWLKEVERRMVAEKEVTKLKAERDAGDTIKDRHIIIEDARSANAPELDAGSIEGAEIVQIDEVVEEIVQPEMEAQSSQHTQVIEISRDCVDGGRKICGEAPCGFAEAGSISKDSEERSTSMRKLFMAVVLCVIFMTVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIERIIAGPKNVDGFLMFLVSAFGLVVNIIMALLLGHDHGHGHHGHGHGHDGHGHGHDGHGHSHGFTVSTHHDGRHTKDEHHDTHDDHAHHHDEKHPKDVHKEVIEPLLGESKGGTKKKKQRNINVQGAYLHVLGDSIQSIGVMIGGGVIWYKPDWKIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATKLERGLLDMEDVVAVHELHIWAITVGKVLLACHVKIRREADADMVLDKVIDYIKRVYNISHVTIQIER 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01577 511 Gene3D Cation efflux protein transmembrane domain 155 432 IPR027469 -
Pste6g01577 511 Pfam Cation efflux family 159 433 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pste6g01577 511 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 439 510 IPR036837 -
Pste6g01577 511 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 111 511 - -
Pste6g01577 511 NCBIfam cation diffusion facilitator family transporter 156 511 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pste6g01577 511 MobiDBLite consensus disorder prediction 287 346 - -
Pste6g01577 511 MobiDBLite consensus disorder prediction 297 346 - -
Pste6g01577 511 SUPERFAMILY Cation efflux protein transmembrane domain-like 153 434 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01577 Pste-Chr6 6880876 6899358 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01577 127 511 Inorganic Solute Cotransporters AT3G58810 67.273 2.30e-167 477
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01577 6 6880876 6899358 Pste6g01577 6 6880876 6899358 ECH