Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01564 AAAAAAGTGATTAATTAGAATAGAATTATAAAGTTTGATATATATAGTCATATAATTAAATTTGAATTGTCTAGCCATTAGCCATCAACTGTGTGTGTATATAAAAGCAGACGCAGAGTGGATGTAGTAAAAGACAGAAGATTTTGCAATTCCAATTCCCCACTCTGCGTAATTAGTGGTTTGTTAAGGGATGGAAGGAGAGAAAGATGGGATCCTTTTAGCCATGAACATAATGTCTACGATGGTGTATCCCTTTGCGATTAGGACAGCGATTGAGCTGGGGATATTTGACATAATAGCAAAATGTGGTGAAGGTGCAAAGGTGTCAGCAGAGGAGATAACAGATGAAATTGGCACAAAGAACCCAGAAGCAGCCACAATGCTGGATAGGCTTCTCAGGTTATTGGCCAGTCACTCCATGCTGTCTTCATCTCTTGCTCAAGATGCCCATAAGTCTCCTAAGAGGCTCTACAGTCTCACCTCTGCGTCCAAGTATTTTGTCACCGATGCTGATGGCATCTCTCTCGGACCTGTCTTTCACTTGCTTCACGATGAGGTCTTCTTCCAAAGCTGGAGCGAACTGAAAGGAGCAATATTGGAAGGGGGAGTAGCATTCAACAGGGTTCATGGGATGCATGCATTTGAGTATTCAGCTATGGATCCCAGGTTCAATGATGTTTTCAACAAAGCTATGATGAGCCTTACCACCATAATCATGAAGAGGGTTCTTGAGTTCTACGATGGTTTTAAGAACATCAATAGGCTAGTGGATGTGGGTGGTGGTCTTGGGATCAATCTCAAATTAATCACTTCTAAATATCCAAATGTCCGCGCTGTTAACTTTGATTTGCCACATGTCATACAGCATGCCCCTACCTACCCTGGCGTCAAACATGTAGGAGGAGATATGTTTGAGAGTGTTCCCAACGGAGACGCCATTTTTATGAAGTGGATACTTCACGATTGGAGTGATGAGCAGTGCTTGAAGTTGTTGAAGAATTGCCATAAAGCTATTCCTAAGGATGGAAAAGTAATTGTTGTGGACATGATGGTTCCCGTTTTGCCGGATAGTACAGTTACTTCAAAGAGTGCTTTCCAATCTGACCTCTTGATGATGACTCAAAACCCAGGAGGAAAAGAGCGAACCAAAGATGAATTCATGGAATTGGCACTTGCTTCCGGATTCACTTCCATCAAATTCATTTGCTGTGTCTCTGGCTTCTGGGTTATGGAGTTTTTCAAGTAGACACTCAACCTTGCCTTCAAAAATTATTCGTTCCAACTTGCTTTCCTACCATTCTCCACGCAATAATTCTAAGATACTTTATCTTTCGGTATTCTTCACTTTAATATTCATGACTAGGATCAATATCTTTTTGGTATAAAATAATGGTGTTTTTTCTTGTCGTTTTTTCTTTTTTAATCTCATCTTACACATTAATGTCAGAACTCTGAAAGACGTAAGGAACATTGCCTCTGTTTTTGTTTATAAGGTGATTGGGACCTATTACTTGACGAAATCGTATGGGAGAATAAATTATTGTTCAAAGGAAGAAAAACTACCTTCTGATGACTTCCTCTGCTTTGCAAGATGGGG 1597 0.402 MEGEKDGILLAMNIMSTMVYPFAIRTAIELGIFDIIAKCGEGAKVSAEEITDEIGTKNPEAATMLDRLLRLLASHSMLSSSLAQDAHKSPKRLYSLTSASKYFVTDADGISLGPVFHLLHDEVFFQSWSELKGAILEGGVAFNRVHGMHAFEYSAMDPRFNDVFNKAMMSLTTIIMKRVLEFYDGFKNINRLVDVGGGLGINLKLITSKYPNVRAVNFDLPHVIQHAPTYPGVKHVGGDMFESVPNGDAIFMKWILHDWSDEQCLKLLKNCHKAIPKDGKVIVVDMMVPVLPDSTVTSKSAFQSDLLMMTQNPGGKERTKDEFMELALASGFTSIKFICCVSGFWVMEFFK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01564 351 PIRSF O-mtase 2 351 IPR016461 GO:0008168
Pste6g01564 351 Gene3D - 1 103 IPR036388 -
Pste6g01564 351 FunFam Caffeic acid O-methyltransferase 104 351 - -
Pste6g01564 351 Gene3D Vaccinia Virus protein VP39 104 351 IPR029063 -
Pste6g01564 351 CDD AdoMet_MTases 191 284 - -
Pste6g01564 351 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 12 351 IPR016461 GO:0008168
Pste6g01564 351 SUPERFAMILY "Winged helix" DNA-binding domain 6 106 IPR036390 -
Pste6g01564 351 FunFam Caffeic acid 3-O-methyltransferase 1 103 - -
Pste6g01564 351 Pfam Dimerisation domain 23 73 IPR012967 GO:0046983
Pste6g01564 351 Pfam O-methyltransferase domain 128 332 IPR001077 GO:0008171
Pste6g01564 351 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 349 IPR029063 -
Pste6g01564 351 PANTHER O-METHYLTRANSFERASE 12 336 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01564 Pste-Chr6 6835691 6839775 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01564 4 351 Monolignol Biosynthesis Gene Families AT5G54160 50.000 1.51e-131 378