Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01558 AGATAGTGGATAGGGAGAGGAGGAAATGGAAGAAGAAAAAAGCTTAAACTACGCAATGCAGGTGGTGAACTCGAACGTGTTATCGGTGGTGATGTACGTGACGACGGAGCTTGGGATATTTGACATAATAGCGAAAGCAGGTGAGGGTGGGAAGCAGGTATCAGCGAGGGACATTGCAAGAGAGATTGGAGTTGAAGGGAAGAATGAAGAGGGAAGCACAATGCTGGATCGAATGCTGAGAATGTTAGCATGTCACTCCATCATTAACTGCACATGCACAGTGGATGAAGATGATCCTCAGCATTTGAAGCGACTATATGCCATCAACAACGTCTCCAAATACTTTGCTTCCATTCATGCAGATGCATCAGGCTCACTAGGCCCTTTGACCCTGTTGACTCTCAACAAGCCTTCCTTTCACAACTTGTTCCAACTGAAAGATGCAATTATGGAAGGAGGCATTCCATTCAACAAGGTCCATGGCAAACAGCTATTTGAATATTCCAACATGAATTCGAGCTTCAATAAGCTTTTCATAGAAGGAATGAACAACTTTGCGACTTTAATTATGAAGAAGATTGTCGAATGCTACAAAGGGTTTGAGCACATGAATAGTCTAGTAGACGTTGGCGGTGGCCTTGGAGCCACTCTTAAAATAATTACTTCTAAATACCCTCACATTAAGGGTATCAATTTTGACTTGCCTCATGTCATACAACATGCCTCTCCCTATCCCGGTGTGGAGCATGTGGGAGGAGATATGTTTGAAAGTGTGCCAAAAGGAGATGCAATTTTGATGAAGTGGGTGCTTCATGATTGGAGTGATGAGTGGTGCTTGAAGGTGTTGAAGAAGTGCTATGATGCTATTCCTAATGATGGAAAGGTGATAGTAGTGGATGCAATTCTTCCATTTGAACCAAACACAACAGGTTCAGCAAAGAGCATTTCCCAATTTGATGTACTGATGATGACAACAAACCCAGGAGGGAAGGAGAGAAGTGAAGAGGAATTCATGGCATTGGCCAAAGGAGCTGGATTCAGTGGCATTAGATACGCATGCTTTGTTTGTGATGTTTGGGTGATGGAGTTCTTTAAGTAGACATTACCAATGGATGCTCTCTTCCTTCCCTTAGCCTACTAATTTAATTTCTGCCTCTGTCAAAAGATTCTTGGAATAAATTTTTGAGTAATGATAAACATATCTCTTTTTAATTGATACA 1220 0.4189 MEEEKSLNYAMQVVNSNVLSVVMYVTTELGIFDIIAKAGEGGKQVSARDIAREIGVEGKNEEGSTMLDRMLRMLACHSIINCTCTVDEDDPQHLKRLYAINNVSKYFASIHADASGSLGPLTLLTLNKPSFHNLFQLKDAIMEGGIPFNKVHGKQLFEYSNMNSSFNKLFIEGMNNFATLIMKKIVECYKGFEHMNSLVDVGGGLGATLKIITSKYPHIKGINFDLPHVIQHASPYPGVEHVGGDMFESVPKGDAILMKWVLHDWSDEWCLKVLKKCYDAIPNDGKVIVVDAILPFEPNTTGSAKSISQFDVLMMTTNPGGKERSEEEFMALAKGAGFSGIRYACFVCDVWVMEFFK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01558 357 Gene3D Vaccinia Virus protein VP39 167 346 IPR029063 -
Pste6g01558 357 FunFam Caffeic acid O-methyltransferase 110 357 - -
Pste6g01558 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Pste6g01558 357 Gene3D - 18 185 IPR036388 -
Pste6g01558 357 Pfam Dimerisation domain 26 75 IPR012967 GO:0046983
Pste6g01558 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 11 357 IPR016461 GO:0008168
Pste6g01558 357 SUPERFAMILY "Winged helix" DNA-binding domain 2 108 IPR036390 -
Pste6g01558 357 Pfam O-methyltransferase domain 136 339 IPR001077 GO:0008171
Pste6g01558 357 FunFam Caffeic acid 3-O-methyltransferase 1 107 - -
Pste6g01558 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 355 IPR029063 -
Pste6g01558 357 PANTHER O-METHYLTRANSFERASE 11 342 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01558 Pste-Chr6 6804940 6807855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01558 2 357 Monolignol Biosynthesis Gene Families AT5G54160 48.034 1.14e-116 341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01558 6 6804940 6807855 Pste6g01558 6 6804940 6807855 ECH