Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01545 TATACAAAACAGAGACAGATCTCTTCCTATTGTTCTCGCTTTGTTTCTTTTGCAGTAGCATCATCAAGATACCTTCTTCAGATTCTGCTTACTTTCACCACAACGGCTTTACTATTTACTGCGTTTGGTGTCTCTAAAAATGAAAGGAGCGTAATGGACGCATACTCCTCTGGTGAAGAAGTGGTTGTTAAGACCAGAAAACCATATACAATCACAAAGCAAAGAGAACGATGGACAGATGAGGAGCATAATAGGTTTCTTGAAGCTTTGAAACTACACGGACGAGCATGGCAGCGCATAGAAGGTGATATTATAGCATATAGGAACAAAGACTGCCGTGCAAATCAGGAGTCATGCACAGAAGTTCTTTACAAAGGTCAA 381 0.4042 YTKQRQISSYCSRFVSFAVASSRYLLQILLTFTTTALLFTAFGVSKNERSVMDAYSSGEEVVVKTRKPYTITKQRERWTDEEHNRFLEALKLHGRAWQRIEGDIIAYRNKDCRANQESCTEVLYKGQ 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01545 127 Pfam Myb-like DNA-binding domain 75 100 IPR001005 -
Pste6g01545 127 Gene3D - 77 119 - -
Pste6g01545 127 NCBIfam myb-like DNA-binding domain, SHAQKYF class 73 101 IPR006447 GO:0003677
Pste6g01545 127 SUPERFAMILY Homeodomain-like 69 99 IPR009057 -
Pste6g01545 127 CDD SANT 77 113 IPR001005 -
Pste6g01545 127 ProSiteProfiles Myb-like domain profile. 70 113 IPR001005 -
Pste6g01545 127 PANTHER SWI/SNF COMPLEX-RELATED 49 104 - -
Pste6g01545 127 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 100 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01545 Pste-Chr6 6749026 6749720 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste6g01545 Myb_DNA-binding 1.2e-06 CL0123