Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01538 GGGGAGCATATCTATCTAAGATGAAGAAAAGAGAATAGAGAATTGAGAATTGAGAATTGAGAGAAGAAGAGAAGTGTGTGTAGTGAATTTTGGATAAAGAGAGTGATGGAGTTGGAAGGAGAGAGAGTGATAGGGGATTACATATTGGGTCCTCGAATCGGGTCGGGTTCATTCGCGGTGGTGTGGCGTGCAAGGCATCGGAGTTCTGGTTTCCAGGTTGCGGTTAAAGAGATTCACAACACCCAACTCACTCCCAAAGTCAGACAAAACCTTCTCAAAGAGATTTCTATCCTCACAACCATTCATCACCCCAACATCATTCGACTATTCCAAGCTATTCAGACCAACCACAGGATTTACCTTGTTTTGGAGTATTGTTCTGGTGGGGACCTCTCTGCATACCTTCATCGCCATGGTAAAGTTACTGAACCGCTCGCACGCCATTTCATGAGGCAACTCGCTGCCGGCTTGCAGGTGCTTCAACAAAACAACCTCATTCATAGAGATTTAAAACCACAGAATTTACTATTGGCAACTACTGCAGCTACACCAATTATGAAAATAGGGGATTTTGGTTTTGCAAGGTCTCTCACACCCCAAGGATTGGCTGATACACTATGTGGTTCACCCTATTACATGGCTCCAGAGATAATTGAAAATCAAAAGTATGATGCCAAGGCTGATTTATGGAGTGTAGGGGCAATATTGTATCAACTAGTGATTGGGAGACCACCATTTGATGGGAACAGTCAATTGCAGCTTTTTCAAAATATTTTAGCATCTAAAGAAGTGCAATTTCCACCAGAGGCATTAAAAGTGCTACATTCTGATTGCTTGGATCTTTGTAGAAATCTTTTACGTCGAAACCCAGGTATTTATATGCATGGACATTTATGCATTGTTTATTCTGCTGTACTGCTTTGTGAATGTGTAAAGCAGAAGAATGAGAGATTAACTTTTAAGGCATTCTTCAATCACAATTTCCTAAGGGAACCCAGGCCAACCATAAATGTTGAGCAGTTGCAATTACCTCAATCAGAAAGATTGACTGATCATCAATTAGGTGGCCCTGCCTCTGAGATGTCTCAATCACATTCTACGGTAGTCAGTCCAACTGTCGATGAAACTATGCCTTTGCAAAGAAAGGATGGCAAGATTACAACTAAGAGTGCTAAAGGGTCAACTCCAACTATTGCAAGTGATAAGCTGGGGAAGGCTGTTGATGCTGGTGCTCCTTTGTCAAACCAACCCCGAGTTTCCCATTTAATGGAGTCCATCGAGAAAGATTATGTCCTGGTCAATTCACATTTCACATCATTGGAGGCTTTCTCTGACTACTTTGAGGAATCTATGCAAGATAATTTCCCATGCAGGATTTCTCTAATTCCTTCAAAGAAGAGTAATATGGAGGTTGGAGTTGCAAAACAAACGAAGGATCTGCCCTCTTCCTCCACTGAAGGATTGGAGAATTTAAAAAGCAATAGAATTGAGGCATATGTGGCATTCTGTGAATTTGGTGCTTTAAGGAAAGAGCACGGAATTTCCTTGCTGCCCCCTTCGTACAGATTAGAGTTGTTGCATCAGTATGTGCAGATCCTTGCAGAACTTTCACAAGAAAAGTACAATACAGGACTGTATCTAGAGTCGCTTGCAGTGGAGTTGGTGATTTTGGCTATATGGAAAAAGAATCTACAAATTTGTAGCTCTTGGCTTGCCTCCATTAGTAAGAGTGAGTTGCCTGGAAGTAGTTCAGCTAATGAATCCGCCATGTCTGCGACTGATGTTGACTTACCACAGACTACAGAGCAGAAAATAAATTTTAGTGATCCTTCATCTGTCTCCCTGTGGGTCAAACATGAGTTTATTGATGCAGTTGACCGTGCTGAGAAACTATCATGTCATGTTCAAAATATGGATGTTGAGATGCCAGATGCAATGGAAATTATATTCCAAAAAGCTCTCTTAATTGGGACAAGTGGTGCTGTAGATGAGTATATGGAGAACAGAGTCAGGGCTGCTGCATGTTACTCAAAGGCGATGCTTCTATTTTCATTTATTGTGCAAGAAGCAGAGAACCTTCCACTGAATCCACCATTTTCACTTATTGCAACTAATAAGGAGCGAATCTTAAAATATATTCATAGCTTGCAGTCTCGGAAAAAAATTTCATTAGAGTGAGTCCTCTTCAAAGAAAGCACATTCACTTTTATCCAAGTAAATAACTGGTTTATAAGTTCATCTTTGCATCACCACTTTTGGAATCGGTGAAGCAATTTGTTGCTGGCTGACATGAATGTTGACTTCCTATGATGAGTACAAACAAGGAGCAACCGTTGATAGATACCATATTGTATATAGATATTCATAACCTACCATGAGCCTTGCAAGGGGACTTTGTCTATGCTTTTACTGCATGATTCATGTATAGAATGTTAATTCTTTGATATAAAATCTGTAAATAGTGTATAGCTCATGGTCTTCTACAATTTTGAAACCTCTACATGATCAATGAATTGAAATATTTTGGGA 2529 0.4021 MELEGERVIGDYILGPRIGSGSFAVVWRARHRSSGFQVAVKEIHNTQLTPKVRQNLLKEISILTTIHHPNIIRLFQAIQTNHRIYLVLEYCSGGDLSAYLHRHGKVTEPLARHFMRQLAAGLQVLQQNNLIHRDLKPQNLLLATTAATPIMKIGDFGFARSLTPQGLADTLCGSPYYMAPEIIENQKYDAKADLWSVGAILYQLVIGRPPFDGNSQLQLFQNILASKEVQFPPEALKVLHSDCLDLCRNLLRRNPGIYMHGHLCIVYSAVLLCECVKQKNERLTFKAFFNHNFLREPRPTINVEQLQLPQSERLTDHQLGGPASEMSQSHSTVVSPTVDETMPLQRKDGKITTKSAKGSTPTIASDKLGKAVDAGAPLSNQPRVSHLMESIEKDYVLVNSHFTSLEAFSDYFEESMQDNFPCRISLIPSKKSNMEVGVAKQTKDLPSSSTEGLENLKSNRIEAYVAFCEFGALRKEHGISLLPPSYRLELLHQYVQILAELSQEKYNTGLYLESLAVELVILAIWKKNLQICSSWLASISKSELPGSSSANESAMSATDVDLPQTTEQKINFSDPSSVSLWVKHEFIDAVDRAEKLSCHVQNMDVEMPDAMEIIFQKALLIGTSGAVDEYMENRVRAAACYSKAMLLFSFIVQEAENLPLNPPFSLIATNKERILKYIHSLQSRKKISLE 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01538 690 MobiDBLite consensus disorder prediction 317 337 - -
Pste6g01538 690 SMART serkin_6 12 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01538 690 ProSiteProfiles Protein kinase domain profile. 12 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01538 690 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 4 618 IPR045269 GO:0004674|GO:0006914
Pste6g01538 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pste6g01538 690 FunFam Non-specific serine/threonine protein kinase 1 92 - -
Pste6g01538 690 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Pste6g01538 690 Pfam Protein kinase domain 16 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01538 690 FunFam Maternal embryonic leucine zipper kinase 4 261 - -
Pste6g01538 690 CDD STKc_ATG1_ULK_like 18 293 - -
Pste6g01538 690 Gene3D Transferase(Phosphotransferase) domain 1 3 353 - -
Pste6g01538 690 SUPERFAMILY Protein kinase-like (PK-like) 8 256 IPR011009 -
Pste6g01538 690 MobiDBLite consensus disorder prediction 321 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01538 Pste-Chr6 6729902 6734842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01538 8 255 CBL-interacting serine-threonine protein kinases AT2G30360 35.433 5.60e-47 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Pste6g01538 Pkinase 1.3e-66 CL0016