Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01511 ATAACTTGTGTTGGTTCGTCTTTTCTTCTTCTCCTTTTATATGTTGAAAATATAGTTCAACAAGCAATGGGTAGCCCAACTTCAATGCCTGTAGGATATAGATTCCACCCAACTGAAGAAGAACTTGTGGGTCACTACTTGAAGCACAAATTGCTTGGTAACCATTCCACGGTCCATAATGTCATTGCTGAGATTGATATTTGCAAGTTTGAACCTTGGGACCTTCCAGCATTTTCCAAGGTAAAATCAGATGATCAAGAATGGTTTTTCTTCAGTCCTCTTTGTTTGAAGTTCACAAAGGACACAAGGAACAGGTGTAACAGGAAAACCAAAGCTGGCTTCTGGAAGCCAACCGGTAAAGACCGTAACATTAAGACCCGAGGCACCAACAATGTCATTGGCACCAAGAAGACTCTGGTTTTCTACGAGGGTCGTAGTTCTCATTGTGTCAAGACCAATTGGGTCATTCACGAATATCATGCATTTACTTTTCCTGAAGACAAGGTAGGAATGTCGTGTAATGTTACTATTTTGCTTTACCACTTGGTTAATATGTACTTCATCAAGGTTGCTTCTCTTTGGCATTTATGTATGCGCTTAACTTTTTGTTTTGTCTTATGTCGCTTATTCAACAAAGATGAGAAAAAATCAGAACGAGGAGTTGGTGCATTGATACATGATGAAGGGGAGCCTAGTAGCCATATTGCAACCGACTTTGTAAACCAAGAAACTGAGGATAGCATTCCTAATAGAGGCTTTGTCTTGCGTCACTTAATCAACAAAGCTGAGAAAAAAGCGGAACGAGTAACTGATACATTGATACATGATGAAGGGGAGCTAAGTAGGCATATTCCTGCTGACTTTGTAAACCAAGAAGCTGAGGATAGCATTCCTAATGTATATACATTGCCAGAAGTGAATCTGGAATCAATCTTTCCAACACCTCCTCAGGCAGAAGAATGTGATGTCTGCTCACTAAAACAGTCTTCAATTGTCATTGAACCCGAACAATCTTCCCAAGGTTCCTCGGGTCGCAATGCCTGCGCTGGGGAGGAAAACAGCGTTATGCGCACTCCATTGGAAACTGTTATAGAGGAAGAGCATCTTCATAATATATATATTGATACATTCTTGAATGAAATTTTAGTTGGCCAGGATACTTTTAATGGTAATGAAACATTACCTGCTTTTCTTATAGAAGCAATACCTGCTTTGAAGAAGGCACATTATGAAAGCAGAGAAACAGACAGTGAACCATTGTCTGCAGAGGAAATCAACTGCCCCCATGCCCGATCCTTATCATGGACAGGGGTCTCAAGGAGCAGTTCCTGGAAAGACCAAGTAGATTACATTCCTGAGGACCAAGTCCATAGGGAAAACCTAGTCATGTCAATGGTGAAACCGTTATATGATGCTGTTTATGCTCACCCTCTTCCAGTGTCTAGAAATGAAGAGCTAGATCTCCATCTTCAAGATGCAAAAGTAAATATCATTCAGTGTCAATCAACTGTGCCACTGAGAGACGATGGCTCTCAAGGAGATGGAAACGGAGAGCCTGCCTTTAAGGAAACAGATATACTGGAGTCAAACAAAGGGCATAAAGAATTTCAGGAAACCAGTGCAAGAAAAAACTTAGAAAGCACAATAGAAGACTCATCCACTCTCAATGGAAAGAGTTCTTCTACATACTTGGAGACTCCCTTTTCAGTGAAATTGTTAAAGCATGACAAAATACTTCACCTACTTTTAGTGAACTTGTTCAAAAGAAAATCTGGTTATGTTAACAGTTCAAAATCATTACACGATGCTGTTAATTCTAGCCCTCCTTCATTGTCATCTATAAATGAAGTAAACAAAGAGAAAAAGAACAGTTCATCTGATAATGAATTCTCGGCACTGGTTGCTTATGGCACTGAGGAAAACACAAAATGGAAAGATCATGTTGTTTCTTCACCTGGAGTTGTGCTTGAACTTGGCGTGGTTTGA 1986 0.4003 ITCVGSSFLLLLLYVENIVQQAMGSPTSMPVGYRFHPTEEELVGHYLKHKLLGNHSTVHNVIAEIDICKFEPWDLPAFSKVKSDDQEWFFFSPLCLKFTKDTRNRCNRKTKAGFWKPTGKDRNIKTRGTNNVIGTKKTLVFYEGRSSHCVKTNWVIHEYHAFTFPEDKVGMSCNVTILLYHLVNMYFIKVASLWHLCMRLTFCFVLCRLFNKDEKKSERGVGALIHDEGEPSSHIATDFVNQETEDSIPNRGFVLRHLINKAEKKAERVTDTLIHDEGELSRHIPADFVNQEAEDSIPNVYTLPEVNLESIFPTPPQAEECDVCSLKQSSIVIEPEQSSQGSSGRNACAGEENSVMRTPLETVIEEEHLHNIYIDTFLNEILVGQDTFNGNETLPAFLIEAIPALKKAHYESRETDSEPLSAEEINCPHARSLSWTGVSRSSSWKDQVDYIPEDQVHRENLVMSMVKPLYDAVYAHPLPVSRNEELDLHLQDAKVNIIQCQSTVPLRDDGSQGDGNGEPAFKETDILESNKGHKEFQETSARKNLESTIEDSSTLNGKSSSTYLETPFSVKLLKHDKILHLLLVNLFKRKSGYVNSSKSLHDAVNSSPPSLSSINEVNKEKKNSSSDNEFSALVAYGTEENTKWKDHVVSSPGVVLELGVV 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01511 661 Pfam No apical meristem (NAM) protein 30 160 IPR003441 GO:0003677|GO:0006355
Pste6g01511 661 Gene3D NAC domain 38 217 IPR036093 GO:0003677|GO:0006355
Pste6g01511 661 MobiDBLite consensus disorder prediction 598 619 - -
Pste6g01511 661 MobiDBLite consensus disorder prediction 546 560 - -
Pste6g01511 661 MobiDBLite consensus disorder prediction 505 560 - -
Pste6g01511 661 SUPERFAMILY NAC domain 26 167 IPR036093 GO:0003677|GO:0006355
Pste6g01511 661 MobiDBLite consensus disorder prediction 524 545 - -
Pste6g01511 661 MobiDBLite consensus disorder prediction 598 625 - -
Pste6g01511 661 Coils Coil 660 661 - -
Pste6g01511 661 ProSiteProfiles NAC domain profile. 29 212 IPR003441 GO:0003677|GO:0006355
Pste6g01511 661 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 29 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01511 Pste-Chr6 6601169 6605986 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01511 28 181 NAC Transcription Factor Family AT4G35580 51.923 2.17e-44 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste6g01511 NAM 5.1e-34 No_clan