Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01503 AAAAAAGTAAGTTGGATTTTTCATAAAAAAAAAAAAGTGAATCAGAGGTTGGCCTGTATGACATGACAAGAACAATTTCCCGTGTTGTATTTTCCTTATGAGCTAAGCCCAAAGTAGGCTTAGATGAATATCAAAGGTAGTGAATGGCTTTTCCTGATATAAAGTAGAAATAAGATTGAAGGCTGATTATGCTGAAGCACAAGAGTTGATTCTTTCCTTGGCACCTTCTTCATCATCTTCATCTTCCTTTCCCTTTCTTCTCTCTCTCACTTGCAATTTGCAAAAACAATGGAGAGCATACTTCCAATACTGGATCACATGCCTATAGGATTCAGATTCCGCCCAACTGATGAAGAGCTTGTCAACTATTACCTCAAACACAAGCTGCTTGATGATGATTTTCCTGTCTACATCATCCCTGAGATCGACCTTTGCAAAGTTGAACCTTGGGACGTACCAGCAAGATCAGTGATCAAATCACATGACCCAGAATGGTTTTTCTTCAGTCCTGTTGATTACAAGTACTTGAAAAGTAAAAGGTTTAACAGGACAACCAAGCGTGGCTTCTGGAAAGCCACTGGAAATGATCGAAACATTAGAACAACAGGCACCAACAATGTCATTGGGACTAAGAAGACTCTCGTTTTCCATGAAGGCCGTGTTCCCCGTGGTGCCAAGACCAACTGGGTTATTCATGAATATCATGCTATTTCCCCCCATGAAAGCCAGAGAACTTTTGTTTTGTGCCGGCTGATGAAGAAAGCTGAGAAGAAAAATGAAGGGGGAATTGAGGCACCGACCTTTGATGAAGGGGAACCCAGCATGGTTTCTGATTATGTAAAACGGGCAAGAGCAGAAGGGATTCCATCTGTAGAGATTTTTCCTGGAACAGATATGGATGAAATCTTTCAGGCCGTGGATCAGGCAGAGAAATTGTTCCCCCCAGCACAGCAGTCTCAAATTGGTATTGAGCTGGATGAATTTTTCCCAAAGTCCCCATCTCTCAATGCCTGTTTTAGAAATGAAAACATTAATATGCAAACTCCATTTGAAGTTACCGATGAGGAAGATGAGTTAGTAAATTCATTTTGGGTTGATGATGAAGAATTTGTTATCAATGAAGAAAGAAGACACTGTTTTGTCAATAGTTCCACCCAACCAAAGTCATTGAGAAGGGTATACAATGCAAACAGTGACATAGATGCTGAAGTTGTCTCTAATTTGCATGACAGCATTAGTTCTGGTGAATACCCTGCATCGAAAATGGTTAAATCATCCTATGATTCTTTCCCTGTTGGCACGAGTTGTCTAGCTTCTAGCCATGAAGCAAACAAAGAGAAAAAGGAGAGCATCATTCAAGATAATTTCTGGGCAGTGGAGACATCCTCTGTTGAGTCAACTGCAGATGAACCTTTGGAGCTCAATTCTATTGAAATTTCTAGTTCTTCTTCTCCAACAAGATTGAAAAATCAGTACCATCTAAGACCAGGCAACTTCATATTACAAAGAACTGTCGCAGGAAGACCTCAAACCCAGAAGAGGGAGGTTTCAACCAATGCAGTATCCCACGTAGAGGCTCGGAAGGAGTTACTCAATGTGAAATCAGAAAAAGATCAGAAAAATGCTCAAAATACCACTTCAAGAGGGAAATTCAAAAGCAGAAGCCCTCAATCCTCTGATTTCAATAACAGTGGCTCTTTCTTTTACATGGAGAGAACTTCAAACCACTTATTTCCACGTTCGGTATATCTTGTCAATGTTGTCATAGGAATTTTGTTGTTAATATTGGGACGTATTAACATGTTAGAACTTAGAAGTACAGGTAGTGTGTATGAAGGGAGGTTGAGGGGTACGATGTTTCCTTTTCATGTAGTTCTGCTACATGGCAAGCTCCAGCTGAAAGACACGCAGTGGAGATATGAAGAAGAGTTAAATCAATGTCATGGGAAGGAGTACATACTAATGAAGTTTTCACCAAATCCACAGGCAATGGATATTGTAGGAGTTGGTTTCCGTCCAACAGAAGAAGAACTTGTAGACTTTTACCTCAAACACATGTTGCTCGCTGATGATCCTCGTGTCAACATCATCCCCGTTATTGATCTCTGCGATGTGGAACCATGGGATGTACCAAGGATATTAGCGAAATCAGCCATACCATTTGGTAACCCAGAATGGTTTTTCTTCAGCCCTGTTGATTTCAAGTATTCAAACAGTAGACGGGTTAACAGGAGAACCAAGCTTGGCTTCTGGAAACCCACCGGAGCAGATCGTAAAGTTAAGACCTGGGAAACCAACACAGTCATTGGGAGTAAGAAGACTCTTGTTTACTATCAAGGCCGTGTTTCCTCTGGTGTCAAGTCCTTCTGGGTTATTCATGAATACCATGCTCTTACCCTTCATCAAACCAAGAGGAATTTTGTTTTATGTCGCTTGATGAAGAAACATCAGAGAACAAATAAAGGTGTAACTGATGCACTGATCTGTGACAAAGAGAAGCAAAGTAAAAGCATGATTTCTGTCTTTGAAAATCTGACAACAGCAGAAGAAATTCCATCTGAAGGTACTTTTAATGGAATGGAAACAATATTTCAGGAAACTCCTCAGGCAGAGAAATACTTCTCCCCGGTACAACAGTGTGCAACTGGAATTGAGCAGGAAGAAACACTTTTTCCAAATTACCCATTTAACAATGCCTATTTTAAAAATGAAAGCAATATTACACAGACTTCATTTGAAACTAGAGAAAAAGATGAGTTTTTGAATTCAAATTTAATGGATAAATATTTATTTCCAGAAAAACAATATCCAAATAGTATTGAGAAGGATGAAACATCTCTTTCAAACTATTCATTTAATTATGTTTATTTTAGAAATGAAAACAAAAACAATACAATACAGACCTCATTTGAAACTACAAAGGAAGATCAATTCCTAAACTCAATTTTAGCTAATGAAAGATGTATTTTTAGAAATGAAAACAAAAACAATACAATACAGAACTCATTTGAAACTACAAAGGAAGATCAATTCCTAAACTCAATTTTAGCTAATGAAAGGTGTGTTTTTAGAAATGAAAACAAAAACAATACAATACAGACCTCATTTGAAACTACAAAGGAAGATAAATTCCTAAACTCAATTTTAGCTGATGAAAGGTGTATGTCTGATGAAGAGTCAGAATCCATAAAAGATATATTATGTGGAATTAATATGATGGAAGATCGGACAATTTCATATGATGTGAACTCCAAAGTTAATTTAGAATTGTATGAAATAAATGCTGATTATCCTGAAAAAACTTCAGAGGTTCTATGTCGCTTGATGAAGGAAGCTGGGAAAACAACTAAAGGGGGGACTGATGCACAGATCTGTGGTGAAGGGGAGCCCAATAGAAGCATGGTTCCGGACTATGAAAATGAAGCAACAGCAGAAGGAATTCCATCTGGCGCTACTATTACTGGAATGGAAACAACCTTTCAGGCAGAGAATTACTTCTCCCCAATTGGAAATGAAAACAACAATATGCAGACTCCATTTGAAACTACAAAGGAAGATGAGTTTCTGAATTCAATTTTTCGTTCACTAAAACCAATGAGGATTGTAGGAGTGGGTTTCCGTCCAACAGAAGAAGAGCTTCTCAACTTTTACCTCAAACATAAGTTGCTTGCTGATGATCCCAGTGTCCAAGTCATCCCTCTTATTGATCTTTGCGAGGTGGAACCTTGGGACGTTCCGGTGATGTTTGAAGGATCAGTGATACGGTTCAACGACCCTGAATGGTTTTTCTTCAGTCATGTTGATTACAAGTATTCAAATAGTAAAAGGATTAACAGGAAAACCAAGTGTGGCTTCTGGAAACCCACTGGGAAAGACCGTGACATTAGGGCCTGGGACACCAACACTGTCATTGGGACTAAGAAGACTCTTGTTTACTATCAAGGCCGTGTTTCCTGTTGTCACAAGTCCAACTGGGTCATTCACGAATATCACGCTGTTACCTTTCATGAAAGCCAGAGGAAATTTGTTTTGTGTCGCTTGGTGATGAAGAAACCTGAGAAAACAGCTGAAGGTGGAATTGATGCACCAATCGAGGAGCCCAGTAGAAGCATGGTTTCTGTCTATGAAAATCTGGCAACAGCAGAAGGAACTCCATCTGAAGGTACTTTTACCGGGATGGAAACAATCTTTCAGGCATCTCCTCAGGCAGACAAATCCTTAACCCCAATACAACAGTCTCCAACTAGTATTGAGAAGGAAGAAACATCTTTTACAAACTACTCACATAACAATGTCTATTTTAGAAATGAAAACAACGTTACGCAGACTTCATTTCAAACTACAGAGGAAGAAGAATTCCTGAATTTTATTTTAGCTGATGAAAGTATAGTCATTGATGAAGAGATTATACATGGTTTTGTCAATAGTTCCACCCAATACTGTAAAAGCAGTGATACAGATGCTGAAGTGGTCTCTAAACTGGATCACACCACTGTGGATATTTCAACAGTGTGTAATGAATATCCTAATTCAGATGATTACGGTTCATCTAAAAGGTTTAAATCATCACATGATGTTGTCCATAGTGACATATGTTTTCCATCTTCTACCAATGAAGAAAATCAAGAAAACAACGAAGATAGTATGTTTAAATGTTATTTCTGGGGAGTAGAGACATCCTCTTGTGAGTCAACAGCAGGGGAGTTGACAAAGGACAGAAAGAATAGGTGTAATAGGAAAACCAACGCGGGCTTCTGGAAGCGGACTGGTAAAGACCGTAATAATAAGACTCGAGGGACCAAGAAGACTCTGCTGAAAAGATATATTGTAGCAGTAGACGTGCCAATAATAATGAAGTACATGAGAGAAGCCCCTAAGTTGTTCCAGCTAGGGGGTAGCAGGAAGCACCAAGAGGCACAAGCA 4923 0.3898 MESILPILDHMPIGFRFRPTDEELVNYYLKHKLLDDDFPVYIIPEIDLCKVEPWDVPARSVIKSHDPEWFFFSPVDYKYLKSKRFNRTTKRGFWKATGNDRNIRTTGTNNVIGTKKTLVFHEGRVPRGAKTNWVIHEYHAISPHESQRTFVLCRLMKKAEKKNEGGIEAPTFDEGEPSMVSDYVKRARAEGIPSVEIFPGTDMDEIFQAVDQAEKLFPPAQQSQIGIELDEFFPKSPSLNACFRNENINMQTPFEVTDEEDELVNSFWVDDEEFVINEERRHCFVNSSTQPKSLRRVYNANSDIDAEVVSNLHDSISSGEYPASKMVKSSYDSFPVGTSCLASSHEANKEKKESIIQDNFWAVETSSVESTADEPLELNSIEISSSSSPTRLKNQYHLRPGNFILQRTVAGRPQTQKREVSTNAVSHVEARKELLNVKSEKDQKNAQNTTSRGKFKSRSPQSSDFNNSGSFFYMERTSNHLFPRSVYLVNVVIGILLLILGRINMLELRSTGSVYEGRLRGTMFPFHVVLLHGKLQLKDTQWRYEEELNQCHGKEYILMKFSPNPQAMDIVGVGFRPTEEELVDFYLKHMLLADDPRVNIIPVIDLCDVEPWDVPRILAKSAIPFGNPEWFFFSPVDFKYSNSRRVNRRTKLGFWKPTGADRKVKTWETNTVIGSKKTLVYYQGRVSSGVKSFWVIHEYHALTLHQTKRNFVLCRLMKKHQRTNKGVTDALICDKEKQSKSMISVFENLTTAEEIPSEGTFNGMETIFQETPQAEKYFSPVQQCATGIEQEETLFPNYPFNNAYFKNESNITQTSFETREKDEFLNSNLMDKYLFPEKQYPNSIEKDETSLSNYSFNYVYFRNENKNNTIQTSFETTKEDQFLNSILANERCIFRNENKNNTIQNSFETTKEDQFLNSILANERCVFRNENKNNTIQTSFETTKEDKFLNSILADERCMSDEESESIKDILCGINMMEDRTISYDVNSKVNLELYEINADYPEKTSEVLCRLMKEAGKTTKGGTDAQICGEGEPNRSMVPDYENEATAEGIPSGATITGMETTFQAENYFSPIGNENNNMQTPFETTKEDEFLNSIFRSLKPMRIVGVGFRPTEEELLNFYLKHKLLADDPSVQVIPLIDLCEVEPWDVPVMFEGSVIRFNDPEWFFFSHVDYKYSNSKRINRKTKCGFWKPTGKDRDIRAWDTNTVIGTKKTLVYYQGRVSCCHKSNWVIHEYHAVTFHESQRKFVLCRLVMKKPEKTAEGGIDAPIEEPSRSMVSVYENLATAEGTPSEGTFTGMETIFQASPQADKSLTPIQQSPTSIEKEETSFTNYSHNNVYFRNENNVTQTSFQTTEEEEFLNFILADESIVIDEEIIHGFVNSSTQYCKSSDTDAEVVSKLDHTTVDISTVCNEYPNSDDYGSSKRFKSSHDVVHSDICFPSSTNEENQENNEDSMFKCYFWGVETSSCESTAGELTKDRKNRCNRKTNAGFWKRTGKDRNNKTRGTKKTLLKRYIVAVDVPIIMKYMREAPKLFQLGGSRKHQEAQA 1545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01503 1545 Pfam No apical meristem (NAM) protein 571 700 IPR003441 GO:0003677|GO:0006355
Pste6g01503 1545 Pfam No apical meristem (NAM) protein 1106 1235 IPR003441 GO:0003677|GO:0006355
Pste6g01503 1545 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Pste6g01503 1545 MobiDBLite consensus disorder prediction 433 463 - -
Pste6g01503 1545 SUPERFAMILY NAC domain 1104 1254 IPR036093 GO:0003677|GO:0006355
Pste6g01503 1545 Coils Coil 427 447 - -
Pste6g01503 1545 MobiDBLite consensus disorder prediction 441 463 - -
Pste6g01503 1545 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Pste6g01503 1545 Gene3D NAC domain 1113 1258 IPR036093 GO:0003677|GO:0006355
Pste6g01503 1545 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 315 - -
Pste6g01503 1545 Gene3D NAC domain 578 724 IPR036093 GO:0003677|GO:0006355
Pste6g01503 1545 SUPERFAMILY NAC domain 571 719 IPR036093 GO:0003677|GO:0006355
Pste6g01503 1545 ProSiteProfiles NAC domain profile. 569 719 IPR003441 GO:0003677|GO:0006355
Pste6g01503 1545 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Pste6g01503 1545 SUPERFAMILY NAC domain 8 158 IPR036093 GO:0003677|GO:0006355
Pste6g01503 1545 ProSiteProfiles NAC domain profile. 1104 1254 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01503 Pste-Chr6 6554817 6584674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01503 571 721 NAC Transcription Factor Family AT3G49530 43.590 3.95e-35 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste6g01503 NAM 1.2e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01503 6 6554817 6584674 Pste6g01503 6 6554817 6584674 ECH