Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01485 ATGCCATCAGCATCTTCATCTTCCTCTGCTCATTCCCTTTACACTTATTACATGATTTCCAAGTTAATGGTCTCTATCATAGTACCCTTATTTCTTCTGTCCTTGTTTGTTGTTCAAGTCTCTTCTTGTAACCAGATTGATAAACTCTCCCTTTTGGCCTTCTCTAGTAACATATCCACCTCTTCACCTTATCGTTCTCTCAATTGGTCTGATTCTATTGATTGTTGTAGTTGGGAAGGCATTACTTGTGATGGGGATCTTAGAGTTACACATCTTTTGCTACCATCTAGAGGCCTCACTGGATTCATCTCCCCCTCTCTCACAAACCTCTCTTCTCTCTCCCACCTTAATCTCTCCCATAATAGATTATCTGGTAGTCTCGAACACCAGTTTTTCTCTTTGCTCAATCACTTGCTGGTTCTTGATTTGAGTTACAACCGTCTCTCTGGTGAATTGCCACCTTTTGTTGGTGATAACAGTGGCAAAAATAGCAGTGGTGGTGTTATTCAGGAGTTGGATTTGTCTAGTAACTTTTTCAATGAGTCACTTCCAAATTCTTTACTTGAGCACCTGGCAGCCGCAGCAGCTGGAGGGAGTTTGGTGTCTCTAAATGTTAGTAATAACAGCCTCACAGGTCATATTCCCACTTCTCGCTTTTGCATTAATGACCATAACTCCTCCTCTCTCAGATTCTTGGATTATTCCTCCAATGATTTTGATGGTGCCATTCAGCCTGGACTAGGAGCATGTTCCAAGCTGGAGAAGTTTAGAGCAGGTTTCAATTTTCTTTCAGGGCCTATCCCAAGTGATCTTTTTTATGCTGTTTCTCTCACAGAAATCTCATTGCCCCTAAATAAACTCACTGGAACAATTGGTGATGGCATTGTTGGCCTTACCAACCTCACAGTATTGGAGCTCTACTCCAATCATTTCACAGGTTCCATCCCCCGTGATATTGGTAAACTGTCCAAGTTGGAACGGCTACTCCTTCATGTCAACAATTTGACAGGTATTATGCCCCCATCTATGATGAACTGTGTCAATCTTGTGGTGTTGAATTTAAGAGTCAACCTCTTGGAGGGCAATCTCTCTGCATTCAATTTCTCAGGATTCCTCAGACTCACTACACTTGACCTTGGCAACAATTATTTTACTGGTGTTTTACCGCCAACCCTTTATGCATGCAAGTCACTTTCAGCCGTGAGGCTAGCGTCTAATCAGCTTGAGGGAGAGATTTCACCCAAGATACTTGAACTAGAGTCTTTGTCTTTTCTATCAATTTCCACTAACAAGTTGAGGAATGTCACTGCGGCTCTGACAATACTCAGGGGGCTCAAGAACCTTAGCACCCTTATGCTCTCCAAGAATTTTTTCAATGAAATGATACCACAAGATGTGAACATAATTGATCCAGATGGATTCCAAAAACTCCAGGTTTTAGGATTTGGTGGTTGTAACTTTACAGGTCAAATACCAGGTTGGTTTGTAAAACTGAAGAAGCTTGAGGTCTTGGACCTATCCTTTAACCAAATTAGTGGTCCAATTCCTCCTTGGTTAGGTACACTTCCTCAGCTTTTCTACATGGATTTGTCTGTTAACCTCCTTACAGGAATGTTTCCAGTAGAGCTCACAGAACTCCCAGCACTGACGTCACAACAGGCAAATGATAAAGTGGAAAGAACTTACTTTGAGTTACCTGTCTTTGCTAATGCAAACAATGTTTCCGTACTGCAATATAATCAGCTTTCAGGCTTACCTCCAGCCATATATCTGGGAATCAATCAGCTTAATGGCAGTATCCCTATTGAGATCGGGAAACTCAAAGTCCTTCATCAACTGGACCTGAAAAAGAACAACTTCTCTGGCGATATACCAATTCAGATTTCAAACTTGACTAACTTAGAGAAACTAGACCTCTCAGGAAACCAACTATCTGGTGAAATTCCTGATTCCCTCAGAAGATTACATTTCTTGTCTTTTTTCAGTGTAGCATTTAATAATCTTCAAGGACAGATACCAACTGGTGGTCAATTTGATACTTTCTCCTCTTCCAGCTTTGAAGGAAACGCACAATTATGCGGTCCAGCTATTCAACGCTCTTGTCCTTCTCAACCGAATTCTCCTAATACTACAGCGGCTAGTCGCAGCTCAAACAAAAAAGTATTGATTGTACTTATCATTACAGTCAGTTTTGGCTTTGCTTCCTTGATAGCAGTGTTGACACTGTGGGTACTCTCCAAGAGGAGGGTCAATCCAGGAGGAGAGCCTGACAAGATTGAAATGGAATCAATTTCAGCCTATTCCAACAATGGAGTTCATCCTGAGGTTGACAGGGAGGCTAGCCTAGTGGTGTTGTTTCCCAACAAGAATAATGAAACCAAGGACCTTACCATATTTGATATCCTAAAAGCCACTGAAAATTTCAGTCAGGCAAACATAATAGGATGTGGGGGTTTTGGTTTGGTTTATAAAGCAACTTTTCCAAATGGAACTACCCTAGCCATCAAGAAACTTTCAGGGGACTTGGGTCTCATGGAAAGGGAATTCAAAGCAGAAGTAGAGGCTCTCTCTACTGCACAACATGAGAATCTGGTGGCATTGCAAGGCTATTGTGTGCATGATGGATTCCGGCTTCTCATGTATACTTACATGGAAAATGGAAGCTTGGATTACTGGTTGCATGAAAAGCCTGATGGTGCATCTCAACTTGATTGGCCAACTCGCCTGAAGATTGCACAAGGTGCAAGCTGTGGTTTGGCTTATTTGCATCAGATTTGTGAACCACACATTGTGCATCGTGATATAAAGTCGAGCAATATACTCCTTGATGAAAAATTTGAAGCACATGTTGCTGATTTTGGGTTATCCAGATTGATTCTTCCATATCATACTCATGTTACAACTGAACTTGTAGGTACGTTAGGCTACATTCCCCCAGAGTATGGACAAGCATGGGTGGCTACTCTGAGAGGAGATGTGTACAGCTTTGGGGTTGTCATGCTTGAGCTGCTCACTGGGAGGAGGCCTGTAGATGTATGCAAGCCAAAAATGTCAAGGGAATTGGTTGGCTGGGTTCAACAAATGAGGATTGAAGGAAAACAAGATCTAGTATTTGACCCTCTTTTGAGAGGGAAGGGGTTTGAAGGACAGATGCTGAAGGTACTGGATGTGGCTTGCATGTGTGTCAGCCACAATCCTTTCAAGAGACCAAGCATCAGAGAAGTTGTTGAATGGCTGAAGAATGTAGGATCAGACAACCAGCCAACACAGAAATAA 3276 0.4209 MPSASSSSSAHSLYTYYMISKLMVSIIVPLFLLSLFVVQVSSCNQIDKLSLLAFSSNISTSSPYRSLNWSDSIDCCSWEGITCDGDLRVTHLLLPSRGLTGFISPSLTNLSSLSHLNLSHNRLSGSLEHQFFSLLNHLLVLDLSYNRLSGELPPFVGDNSGKNSSGGVIQELDLSSNFFNESLPNSLLEHLAAAAAGGSLVSLNVSNNSLTGHIPTSRFCINDHNSSSLRFLDYSSNDFDGAIQPGLGACSKLEKFRAGFNFLSGPIPSDLFYAVSLTEISLPLNKLTGTIGDGIVGLTNLTVLELYSNHFTGSIPRDIGKLSKLERLLLHVNNLTGIMPPSMMNCVNLVVLNLRVNLLEGNLSAFNFSGFLRLTTLDLGNNYFTGVLPPTLYACKSLSAVRLASNQLEGEISPKILELESLSFLSISTNKLRNVTAALTILRGLKNLSTLMLSKNFFNEMIPQDVNIIDPDGFQKLQVLGFGGCNFTGQIPGWFVKLKKLEVLDLSFNQISGPIPPWLGTLPQLFYMDLSVNLLTGMFPVELTELPALTSQQANDKVERTYFELPVFANANNVSVLQYNQLSGLPPAIYLGINQLNGSIPIEIGKLKVLHQLDLKKNNFSGDIPIQISNLTNLEKLDLSGNQLSGEIPDSLRRLHFLSFFSVAFNNLQGQIPTGGQFDTFSSSSFEGNAQLCGPAIQRSCPSQPNSPNTTAASRSSNKKVLIVLIITVSFGFASLIAVLTLWVLSKRRVNPGGEPDKIEMESISAYSNNGVHPEVDREASLVVLFPNKNNETKDLTIFDILKATENFSQANIIGCGGFGLVYKATFPNGTTLAIKKLSGDLGLMEREFKAEVEALSTAQHENLVALQGYCVHDGFRLLMYTYMENGSLDYWLHEKPDGASQLDWPTRLKIAQGASCGLAYLHQICEPHIVHRDIKSSNILLDEKFEAHVADFGLSRLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVDVCKPKMSRELVGWVQQMRIEGKQDLVFDPLLRGKGFEGQMLKVLDVACMCVSHNPFKRPSIREVVEWLKNVGSDNQPTQK 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01485 1091 Gene3D Ribonuclease Inhibitor 44 194 IPR032675 -
Pste6g01485 1091 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 268 363 - -
Pste6g01485 1091 Gene3D Ribonuclease Inhibitor 195 272 IPR032675 -
Pste6g01485 1091 Pfam Leucine rich repeat N-terminal domain 47 84 IPR013210 -
Pste6g01485 1091 Pfam Leucine Rich Repeat 633 654 IPR001611 GO:0005515
Pste6g01485 1091 SUPERFAMILY Protein kinase-like (PK-like) 794 1079 IPR011009 -
Pste6g01485 1091 FunFam Receptor-like protein 2 45 165 - -
Pste6g01485 1091 Pfam Leucine rich repeat 476 535 IPR001611 GO:0005515
Pste6g01485 1091 Pfam Protein kinase domain 809 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01485 1091 FunFam Leucine-rich repeat receptor-like protein kinase 884 1090 - -
Pste6g01485 1091 SUPERFAMILY L domain-like 63 289 - -
Pste6g01485 1091 ProSitePatterns Serine/Threonine protein kinases active-site signature. 930 942 IPR008271 GO:0004672|GO:0006468
Pste6g01485 1091 ProSitePatterns Protein kinases ATP-binding region signature. 814 837 IPR017441 GO:0005524
Pste6g01485 1091 FunFam Tyrosine-sulfated glycopeptide receptor 1 368 706 - -
Pste6g01485 1091 SMART LRR_typ_2 371 395 IPR003591 -
Pste6g01485 1091 SMART LRR_typ_2 631 655 IPR003591 -
Pste6g01485 1091 SMART LRR_typ_2 419 442 IPR003591 -
Pste6g01485 1091 SMART LRR_typ_2 298 322 IPR003591 -
Pste6g01485 1091 SMART LRR_typ_2 110 134 IPR003591 -
Pste6g01485 1091 SMART LRR_typ_2 498 522 IPR003591 -
Pste6g01485 1091 SMART LRR_typ_2 135 159 IPR003591 -
Pste6g01485 1091 Gene3D Transferase(Phosphotransferase) domain 1 884 1091 - -
Pste6g01485 1091 Gene3D Phosphorylase Kinase; domain 1 773 883 - -
Pste6g01485 1091 PRINTS Leucine-rich repeat signature 113 126 - -
Pste6g01485 1091 PRINTS Leucine-rich repeat signature 631 644 - -
Pste6g01485 1091 ProSiteProfiles Protein kinase domain profile. 808 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01485 1091 FunFam Leucine-rich repeat receptor protein kinase MSP1 776 883 - -
Pste6g01485 1091 SUPERFAMILY L domain-like 223 551 - -
Pste6g01485 1091 ProSiteProfiles Leucine-rich repeat profile. 633 655 IPR001611 GO:0005515
Pste6g01485 1091 Gene3D Ribonuclease Inhibitor 367 708 IPR032675 -
Pste6g01485 1091 PANTHER LEUCINE RICH REPEAT KINASE 2 296 1083 - -
Pste6g01485 1091 SMART serkin_6 808 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01485 1091 SUPERFAMILY L domain-like 474 702 - -
Pste6g01485 1091 Gene3D Ribonuclease Inhibitor 273 366 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01485 Pste-Chr6 6465195 6468470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01485 20 739 Miscellaneous Gene Families AT1G17240 50.619 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pste6g01485 Pkinase 4.3e-38 CL0016