Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01474 CTCAACCACACACCTACCTTTTTCTGTACAAACAAAGATCTGAGTGAGAGAATAGCAGTGATCATGAGCAGCAACAACAACGTTGGAGAATTTGGGGACACCACTCTCACCAAGGTTTTTGTTGGCGGTTTAGCCTGGGAGACTCCCAAGGATGCCCTCAAAGACCACTTTGAGAAGTATGGCGAGATCCTTGAAGCTGTCATTATTTCTGATAAGCATACTGGGAAATCCAAAGGCTATGGCTTTGTGACCTTCAAGGAGGCTGAAGCTGCCAAGAAGGCTTGCGAGGACTCCGCAACTCTCGTTATCAATGGCCGTCGAGCTAACTGCAATCTTGCTTTCCTCGGTGCTCGTCGTCCAAGGTCTTCTTCCAATCCTTCACCACCCCCACAACCACAAGGAGGTGGAGTTCTGAAGAACAATGCACCAAGCGCACCAGCCAATCACGTGCAACCATATTATCATCCAGTGAGGACAACTGCTTTGCCATTCCAGAATCACACTCATCCTTTCTATGGATATGCCCCAACCTACATTGTGACGGACATAAACTGTAATTACAATCAGAAACTGTGCTACGGCAGCGGTGGGGCCTACATGAATGGGCACCACTTGTCCCATGTGTACCCCAGGCAGGCTATGGTGGGTGCCAACACACTGATGCCAATGTACCCTCTGTATCAGTACCACCATCCAACGGAGACCGTAGGGTTACCTGCTTACAACTTTTATCAACCGGCACCATGGGCCCCAATCACCATCATGGCCAAGCCATCCTCTATCATTCCTCACACAGGTACAGTTGGCACTGGTGACTGCTTTAAAAGGGTTGTGTGAGAGGAGCTTGAGCTTAGTTGGCTAAATAACAGCAGAGGGAGGGGATTGGTGATGGTGGTGGCCGCACAGAGCAACATTATTATCTGATCTGTCGTGGCTTTTTTTCTTTTTACTTTTGAATATTGTTTCATTTTTAATTGTTAATCTTAGGCAGTTTGTCCATCAGATTCTTTCATTCTCTTTATCTGTCTAACATCTCAGCATGTGCTGTGAACAGTTGCATTCATTTCAAATTATCAATTTGTTCACCTTCACCTGTGTTGTAAAGAAAACTGCATCCCTG 1120 0.4652 MSSNNNVGEFGDTTLTKVFVGGLAWETPKDALKDHFEKYGEILEAVIISDKHTGKSKGYGFVTFKEAEAAKKACEDSATLVINGRRANCNLAFLGARRPRSSSNPSPPPQPQGGGVLKNNAPSAPANHVQPYYHPVRTTALPFQNHTHPFYGYAPTYIVTDINCNYNQKLCYGSGGAYMNGHHLSHVYPRQAMVGANTLMPMYPLYQYHHPTETVGLPAYNFYQPAPWAPITIMAKPSSIIPHTGTVGTGDCFKRVV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01474 257 Gene3D - 3 106 IPR012677 -
Pste6g01474 257 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 85 IPR000504 GO:0003723
Pste6g01474 257 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 94 IPR000504 GO:0003723
Pste6g01474 257 PANTHER BOULE-RELATED 6 226 - -
Pste6g01474 257 SMART rrm1_1 17 90 IPR000504 GO:0003723
Pste6g01474 257 MobiDBLite consensus disorder prediction 96 121 - -
Pste6g01474 257 SUPERFAMILY RNA-binding domain, RBD 12 109 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01474 Pste-Chr6 6419913 6421897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01474 12 157 C2H2 Transcription Factor Family AT2G19380 30.519 4.46e-16 75.5