Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01456 ATGGCCACCATTCTCACCCTCTTCACAGCCATTGCTTTTGTAGTTCAATCATTTCATAAGTACATGATCCAGAGCCTGCGCAAACTGTGTAATCATTATGGATATGCTGCTGCAGTGGAGGAAAATGAAGAGCAACAAAGTGAATATTGTTCAGTGTGTCTAAGTCAAATTTGTAAAGGGGAAAAGGCTAGGTCTCTTCCAGTGTGCAACCACATATATCATGCTGATTGTATCGGTGCTTGGTTGAAGAACCATACCACATGCCCTCTTTGTAGGAACAAAATCACTGACCATATCCCCCCAGAACATAGACATATGAAGAGCTTAGGAGAATCTTTGTTCAATCTCGTGCAGTGTTTCTCTGATCTATTGGTAGTTATTCTCTGCATGATGCTTCCATCCAGTATCACTGAGGGTTTCCTTTTGATCCATTGA 435 0.4161 MATILTLFTAIAFVVQSFHKYMIQSLRKLCNHYGYAAAVEENEEQQSEYCSVCLSQICKGEKARSLPVCNHIYHADCIGAWLKNHTTCPLCRNKITDHIPPEHRHMKSLGESLFNLVQCFSDLLVVILCMMLPSSITEGFLLIH 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01456 144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 34 106 IPR013083 -
Pste6g01456 144 ProSiteProfiles Zinc finger RING-type profile. 50 92 IPR001841 -
Pste6g01456 144 CDD RING-H2_PA-TM-RING 50 92 - -
Pste6g01456 144 SMART ring_2 50 91 IPR001841 -
Pste6g01456 144 SUPERFAMILY RING/U-box 38 98 - -
Pste6g01456 144 Pfam Ring finger domain 49 92 IPR001841 -
Pste6g01456 144 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 23 96 IPR044675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01456 40 97 C3H Transcription Factor Family AT1G53010 53.333 1.01e-16 71.2