Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01437 ATCTTTACTTTTCTCAAGTATTCTGCTCTGTTTTCTCCTCTGTATCAAACAGGGGAAAAGTCCACAACATTAATCCCACTTGTAAAAAACCACACCCCAACCTATGTCCCCAACTTCACGCTACAAATACCTTCCACACACTCCACACTCATGATCTCATTGCATATATCCATCAACTAGAGAGTAGAGACCCCATTTTCTACCCACATTTATTCACCCAAGACCACATAAAAGGCCTAAAAAGCTAGCCACAGCATCACATTGCAAATTGCAACACCATTATTGTTATTATTCTAGTCAATGGAAGGGAAAGAAGAGGATGTGAGAGTAGGAGCCAACAGGTATGGGGAGAGGCAACCAATAGGAACTGCTGCTCAGGCCAAAGACTACAGAGAGCCACCCTCTGCTCCTCTCTTTGAGCCTGGAGAATTGTCATCATGGTCTTTCTACAGGGCTGGCATAGCAGAGTTTGTGGCCACTTTCTTGTTTCTTTACATCACTATCTTGACTGTCATGGGTGTGGCCAATTCTAAAACCAAGTGTTCCACTGTGGGGATCCAGGGCATTGCTTGGGCCTTTGGGGGCATGATCTTTGCTCTTGTTTATTGCACTGCTGGAATCTCAGGGGGTCATATTAACCCAGCAGTGACATTTGGGCTGTTCTTGGCACGAAAACTTTCACTGACAAGAGCACTATTTTACATGATTATGCAGTGTTTGGGAGCTATATGTGGGGCTGGTGTAGTTAAGGGGTTCGAACCACACGTGTATCAGATGGTTGGTGGTGGTGCCAACACACTTGGAACAGGGTACACAAAAGGTGCTGGCCTTGGAGCAGAGATTGTTGGCACATTTGTTCTTGTTTACACTGTCTTCTCTGCCACTGATGCCAAAAGAAATGCCAGAGACTCACATGTTCCTATATTGGCACCATTGCCTATTGGTTTTGCTGTGTTTCTAGTGCACTTGGCTACAATTCCTGTTACTGGAACTGGTATTAACCCTGCTAGAAGTCTAGGTGCAGCTATTATCTACAACAAGGAAGAAGCTTGGGATGACCAT 1062 0.4492 MEGKEEDVRVGANRYGERQPIGTAAQAKDYREPPSAPLFEPGELSSWSFYRAGIAEFVATFLFLYITILTVMGVANSKTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMIMQCLGAICGAGVVKGFEPHVYQMVGGGANTLGTGYTKGAGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPVTGTGINPARSLGAAIIYNKEEAWDDH 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01437 254 CDD MIP 51 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste6g01437 254 ProSitePatterns MIP family signature. 111 119 IPR022357 -
Pste6g01437 254 NCBIfam MIP family channel protein 55 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste6g01437 254 Gene3D Glycerol uptake facilitator protein. 36 254 IPR023271 -
Pste6g01437 254 PRINTS Major intrinsic protein family signature 130 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste6g01437 254 PRINTS Major intrinsic protein family signature 93 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste6g01437 254 PRINTS Major intrinsic protein family signature 179 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste6g01437 254 PRINTS Major intrinsic protein family signature 51 70 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste6g01437 254 PRINTS Major intrinsic protein family signature 215 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste6g01437 254 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 254 IPR034294 -
Pste6g01437 254 Pfam Major intrinsic protein 43 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste6g01437 254 SUPERFAMILY Aquaporin-like 44 247 IPR023271 -
Pste6g01437 254 FunFam Probable aquaporin PIP1-2 36 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01437 Pste-Chr6 6244421 6249176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01437 1 254 Major Intrinsic Protein MIP AT2G45960 85.490 1.16e-164 456
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02134 5 13866748 13868810 Pste6g01437 6 6244421 6249176 PCT