Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01420 ATAAAAAGCATTACAAGACCAAAACTGGGAAGTGGGAAAGAGAGTATTTTGAGTAGACAGAGAGCTAGAAAAAAGCAAACAGAGTGTGTGATTAGAGCTAGAGAGTAGAGAGTAGAGAGTAGAGAGGACAAGTATGGATACCATAAAGTCCTTCAAGGGCTACGGCAAAGTAGACGAGTTGGAGCAGCAAGCCTATCAGAAGAAGACACGTAGGCGCCTCATAATCATCGCAGTCTCTTCGTTCGTTCTAATTGCGCTGATCATCGCCGCGGTCGCAGGGATCGTCATACACAAGCGCAACACCTCATCTTCGCCATCAGCTGACGCGGCCCCGCAAACTCAGTTAACCCCGTCCGCCTCACTCAAAGCTGTTTGCCAGGTGACTCGGTACGCTAACTCCTGCTTCTCCGCTATCTCATCGTTACCGGAATCCAACACCACTGATCCAGAGCTCCTCTTCAAGCTCTCGCTCCGCGTCGCCATTGTCGAACTCTCCAAGCTCGTTAGCTTTCCTTCCAAGCTTCGCGCCAATGCGGAGCACGACGAGCCTCTCAAGAAGGCCATCGATGTCTGCACTTCCCTCATCGGCGACGCGCTCGACCGGCTCAACGACTCTATCACCACTCTCGGAAGCGGCGCCGGGAAGGTTATATCTTCGGCGCGCGTCAGCGACATGGAGACATGGATCAGCGCCGCGCTCACGGACCAGGACACTTGCCTCGACGCGCTCGGCCAGCTGAACTCCACCGCCGCGCAAGACGCTCTTCGGGAGATGGGAACCGCCATGAGGAACTCGACGGAGTTCGCGAGCAACAGTTTGGCCATCGTGACGAAGATCCTAGGGCTGCTGACGCAGTTCGCATCGTCGTTTCACCACCGGCGGCTGCTAGGGTTTCCGACGTGGCTGGGGGTGGCGGAACGGAGGCTGCTGGAGTCGAATGAAACCAATGCGACCCCGGACGCTGTGGTGGCGAAGGACGGTAGCGGACAGTTCACGACGATCGGTGCGGCGCTGAAGTTGGTGAAGAAGAAGAGCGAAAAGAGATTTGCGGTGTACGTGAAGGAAGGAGAATACATAGAGAATATCGATTTGGATAAGAACACGTGGAATGTGATGATCTACGGTGATGGCAAGGACAAAACCGTCGTCGTCGGAAGCCGCAACTTCATGGACGGAACCCCTACTTTCGAAACCGCCACCTTCGCTGTTAAAGGCAAGGGATTCATTGCCAAAGACATAAAATTTGTGAACAATGCTGGTGCATCTAAGCACCAGGCTGTGGCATTCAGATCTGGATCGGATCGCTCTGTCTTCTTTAGATGTTCCTTTGATGGCTTTCAGGATACCCTCTATGCTCATTCCAACCGTCAGTTCTACCGTGAATGTGATATTACTGGCACCATTGACTTCATATTCGGAAATGCAGCTGCTGTTTTCCAAAGTTGCAAAATAATGCCTAGACAGCCTCTACCGAACCAGTTCAACACCATCACAGCACAGGGCAAGAAGGACCCCAACCAGAACACTGGAATTATAATCCAGAAATCAACATTCACTACCTTGGACGACACTCTCACAGCCCCCACATACCTTGGTAGGCCATGGAAAGATTTCTCCACCACTGTCATCATGCAATCTCATATTGGATCATTCTTGAAACCAGTGGGGTGGATGAGTTGGGTCGCCAATGTGGAACCTGCAACTACCATCTTCTATGCTGAATACCAGAATTCTGGGCCCGGAGCAGACGTGTCCCAGAGGGTCAAATGGGCTGGTTTTAAGCCCACTCTCACGGACATGGAGGCCTCCAAGTTCACTGTACAGTCCTTTATTCAAGGTCCGGATTGGTTGCCAAATACTGCTGTGCAGTTTGAGTCCACCTTGTGATTTTAATACGGGTCATACATATAGAGCATCCAGTGTCAACTGCTAATCATATTTTACTTTTCTAAATCATCCCCTTGTAAGTTGTATGTAACATGTATTACAAACTCTACATGCATTTTTTTGACCTACTTTTCCATGGTTTGTAAAATTCTTCTAGACAATGTGGTCTGGAATGATATTTCTAAATTTCAAATGCTAAAAAATTGAACATATTGACTCCATGGAGAAAGACAGAAATCTACCATTACAATCGCATCTTATTTGGAGCATTTATATTCATCTTATATTTTATGTAGTAATACTTAGAGGATCCATAAAAATGCAATTCTTTTTAATTTTTTTAAGTTACTCTTTTTTAGCGGTATTGCATTTCAGG 2264 0.4837 MDTIKSFKGYGKVDELEQQAYQKKTRRRLIIIAVSSFVLIALIIAAVAGIVIHKRNTSSSPSADAAPQTQLTPSASLKAVCQVTRYANSCFSAISSLPESNTTDPELLFKLSLRVAIVELSKLVSFPSKLRANAEHDEPLKKAIDVCTSLIGDALDRLNDSITTLGSGAGKVISSARVSDMETWISAALTDQDTCLDALGQLNSTAAQDALREMGTAMRNSTEFASNSLAIVTKILGLLTQFASSFHHRRLLGFPTWLGVAERRLLESNETNATPDAVVAKDGSGQFTTIGAALKLVKKKSEKRFAVYVKEGEYIENIDLDKNTWNVMIYGDGKDKTVVVGSRNFMDGTPTFETATFAVKGKGFIAKDIKFVNNAGASKHQAVAFRSGSDRSVFFRCSFDGFQDTLYAHSNRQFYRECDITGTIDFIFGNAAAVFQSCKIMPRQPLPNQFNTITAQGKKDPNQNTGIIIQKSTFTTLDDTLTAPTYLGRPWKDFSTTVIMQSHIGSFLKPVGWMSWVANVEPATTIFYAEYQNSGPGADVSQRVKWAGFKPTLTDMEASKFTVQSFIQGPDWLPNTAVQFESTL 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01420 584 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 236 IPR035513 -
Pste6g01420 584 FunFam Pectinesterase 73 236 - -
Pste6g01420 584 NCBIfam pectinesterase inhibitor domain 61 235 IPR006501 GO:0004857
Pste6g01420 584 Pfam Plant invertase/pectin methylesterase inhibitor 77 231 IPR006501 GO:0004857
Pste6g01420 584 SUPERFAMILY Pectin lyase-like 274 581 IPR011050 -
Pste6g01420 584 FunFam Pectinesterase 270 584 - -
Pste6g01420 584 Gene3D - 270 584 IPR012334 -
Pste6g01420 584 SMART PMEI_2 72 231 IPR006501 GO:0004857
Pste6g01420 584 CDD PMEI-like_3 79 235 - -
Pste6g01420 584 ProSitePatterns Pectinesterase signature 2. 420 429 IPR033131 -
Pste6g01420 584 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 236 IPR035513 -
Pste6g01420 584 PANTHER PECTINESTERASE 39 574 - -
Pste6g01420 584 Pfam Pectinesterase 276 569 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01420 Pste-Chr6 6168967 6172284 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01420 1 578 Carbohydrate Esterase AT1G53840 57.047 0.0 675