Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01404 ATGCCTTCTTCTTCAACCACCATAGTTTCAAAATGCGTGATCCATCCAGACAAGAAATCCAACATAAAACCATTGAAACTCTCTGTTTCTGATCTTCCAATGTTGTCGTGTCATTACATACAAAAAGGTGTGTTACTAACAGCTCCGCCCTCTTCCTTCGAACACCTCATTCAATCTCTCAAACACTCTCTTTCCAACGCTCTCTCACTCTTCCCCGCTCTCGCCGGAAGGCTCTCTACCGATTCCGACGAGTTCTTCGCCTATGACATGACCATCTCCTACTCCGGCCACCACAATCCCCTCGCCACCGTCCAAGTCACCGAGCTCGCCGACGGAGTTTTCATCGCTTGCACCGTCAACCATGCCGTCACTGACGGCACTTCCTTCTGGCACTTCTTCAACACCTTCGCCGCCGTCAACAAAGGCGCCGCCGCCAAGAAAATCCTCCGCGCACCGAATTTCTCTCGGGAGACCGTCTTCAACTCCACCGCCGTACTCCCCGTCCCCGCCGGCGGCCCCACCGTGACCTTTGCTGCCGATGAGCCTCTCCGCGAACGCGTCTTTCACTTCTCCCGTGAAGCCATTCAAAAACTCAAACAAAGAGCCAATAACGGAGACAACTCCAACGAACTAACAGAAGTCATGGGAAAACAAGCAAATGACAGCTGGAAAATCATTAACAGTAACGGCAACGGAAATGTTAATGGTAACTGTAACGGTAACGGAAAAATTAACGGAAGAAACGAGATCTCCTCGTTTCAGTCGTTATCGGCGCAGCTCTGGCGAGCGGTGACGCGAGCGAGGAAATTCACCGATCCGAGCAAAACGTCGACGTTTCGTATGGCTGTTAACTGTCGCCACCGTTTGGAACCGAAGATGGACGCGTTTTACTTCGGCAATGCCATTCAGAGCATTCCAACGGTGGCAACCGTCGGGGAAATCCTCTCGCACGATCTGCGATTCTGCGCGGAGCTTCTCCACAAAAACGTGGTCGCGCACGACGACGCTACGGTGCGGCGCGGCGTAGAGGATTGGGAGAACGCGCCGCGGTTGTTTCCGCTTGGAAACTTCGACGGAGCTATGATCACGATGGGAAGTTCTCCGCGTTTTCCGATGTATGACAACGACTTCGGTTGGGGAAGGCCGATTGCGATTCGGAGTGGAAAAGCGAACAAGTTCGATGGAAAGATCTCTGCGTTTCCGGGGAGAGAGGGAAACGGCAGCGTCGATTTGGAAGTCGTTTTGGCACCAAAGACCATGACGGGACTCGAAAATGACACCGAGTTTATGCAATATGTAACTCACTTTGTTACCATGGGTGAGGGCGTCGTTTTGTGTTGGTCAAAGTCAAACGTTCGCGGGTGGGGTAAGGCTGTGTTTGGATGGTTTTTCCCTACAGATTATAATGATTTTCTGTACTTGATTTTGGGGAGGTTTTTTCAGGTGACTAATAACAAGACAAAAAATAATAAGAATTATGATGACGATTATGATAAATGA 1500 0.5053 MPSSSTTIVSKCVIHPDKKSNIKPLKLSVSDLPMLSCHYIQKGVLLTAPPSSFEHLIQSLKHSLSNALSLFPALAGRLSTDSDEFFAYDMTISYSGHHNPLATVQVTELADGVFIACTVNHAVTDGTSFWHFFNTFAAVNKGAAAKKILRAPNFSRETVFNSTAVLPVPAGGPTVTFAADEPLRERVFHFSREAIQKLKQRANNGDNSNELTEVMGKQANDSWKIINSNGNGNVNGNCNGNGKINGRNEISSFQSLSAQLWRAVTRARKFTDPSKTSTFRMAVNCRHRLEPKMDAFYFGNAIQSIPTVATVGEILSHDLRFCAELLHKNVVAHDDATVRRGVEDWENAPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGRPIAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPKTMTGLENDTEFMQYVTHFVTMGEGVVLCWSKSNVRGWGKAVFGWFFPTDYNDFLYLILGRFFQVTNNKTKNNKNYDDDYDK 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01404 499 Pfam Transferase family 81 430 - -
Pste6g01404 499 Gene3D - 86 166 IPR023213 -
Pste6g01404 499 Gene3D - 2 85 IPR023213 -
Pste6g01404 499 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 83 - -
Pste6g01404 499 Gene3D - 181 430 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01404 Pste-Chr6 6086395 6088157 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01404 58 425 Monolignol Biosynthesis Gene Families AT5G48930 24.694 1.21e-23 101