Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01377 CACTTTCTGAGTGAGTGAAACAATTCTCGAAGATCAACAAGGTGTGGTTGCTGAATCGACACTTGAGTTCAAATTCTAGATATGGAAGTTAGAGAAGGAACCACCCGCGTCACAACCCTAAAGTCGGATACTCCCACTGTTCTCCGACAATCAATGGCGGAGGCCCGCAGGCGGAGCCACCGGGAGACGACGCCACTCCATGTGGCGGCCACCGCATTCGGCAGGCCCGACGGAATCATGCACGAAGCCTGCATAAAGTCGCACCGCAGTTCCTCTAACCCCCTTGTGAGCAGGGCGCTGGAGCTATGCTTCGGCCTAGCCCTGCGCCGATTGCCTACTTGGCGGAACAGGAGTTCTTCCGTGAAGCCGCCGATCTCCAGCGCCTTGATGGGCTTCCTGGAGCGGGCCCGGGCCCAGCCCCAGCTGAATAACTGGTACCCAGTTGCGGGTATTGACTTGATAAAAGTGGAGCTGGAGGAGTTAATGATGTCTGTTCTGGACGACCACGACGTGCGCAGGGTCATGCGGAAAGCCACTTTCTCATACCTCGCCGTCAAAGCCAGCATACGGCAGATGCGGTATTTGCATCTTACCCCAACTGAGAGTGAAAGGAGGTTGGAAGAACTAACTGTGAATATATTACAGAGGCCGAAGAGGCGGAACCCTATCATTGTGGGGGAATTGGAGCCCCATGATGCGTTCCAGGAGGTGATGACGAAGCTTGAGAGAACTATGTTCGCCAATGTGATTCATTTGGAGAACGAGCTTCCGAGTGATGAAGCACGGGTATTGGCGACCCTGGAGGAGTTGGGAGAATTGATTGAGAAATGTTCTAGGGCTCAATGGGTTCTTGTTGACTTGGGTGACTTGAAGTGGCTGGTGGAACTGCAGCCTGTGGGGTGTGGTGTTGGTCTTGGGGTCGTTGCGGAGATTGGAACGTGGGTGAGCAAGTTTGCTCAGCGTGGTGCTGGCAACTTAAGCTTGTTAGGTAGTGCTAGTTTCAACACTTGCTTGAGATGTCAGGTGTATTATCCTACCATGGAAAAGGATTGGGATCTTCAGGTATTGCCAATTGCCACCAGAGCCCCAGTCTCGGGTGTCTTTTCCGGAAAGTATGAAGTGTTTTTGAGTTTTAGAGGGGAAGACACGCGAGCTTCTTTCACTTCACATCTGTATGCTTCTCTTCAGAATGCTGGAATCAATGTTTTCAAGGATGACGAGTCACTTCCAAGGGGAGATCAAATTTCATCCTCACTGCTGCAAGCAATCGAACAGTCTCGAATTTGTGTTGTGGTGTTCTCAAGAAATTATGCACAGTCGCAATGGTGTTTAAAAGAGTTGAAAAAAATAATGGATTGTCGTGGAACTATAGGACAGATTGTTGTGCCCGTGTTCTATGATGTTGCTCCCTCTGAAGTACGGCATCAAACAGGCGAGTTTGGCAAGGCATTTCAAAAGCTTATAGATAGGAATTTCATAAAGGAAGATGATTTTGTGCAGCTTTCCAATATGGCGGTTGGTGAAGACGAAGTTGAACTTGAACATATTTTGAGAGGGATTTCGAGGGAGGAAGATGATGTGCAGGGTTGGAGGGAGGCACTTCGTGAGGCTGCTAGCATATCTGGATTTGTAGTCCTAAATTCAAGGAATGAAAGCGAGAGTATAAAAAACATTACCGAAAATGTTACACGCTTGTTAGACAAGACAGAGTTGTTTATTGCAGATAATCCAGTGGGAGTAGAATGTCGAATACAAGATATGATTCATTTGCTAAACCACAAACTATCAAATAAAGTTGTAATAGTAGGGATATGGGGAATGGGAGGCATTGGTAAAACAACCATTGCAAAAGCAATTTACAATAAGATTGGCCGCAATTTTGAGGGAAGAAGCTACCTTGCACAAATTAGGGAAGTTTGGGGGGAAGATGATGGCCAACTCCTTTTACAACAACAACTTCTATTTGATATTGACAATCAAATGAAAACAAAGATACCTAATGTTGAATCGGGAAAAAATATATTAAAGGAAAGACTTCGCCATAAAAGGATACTTCTAATACTCGATGATGTGAATAAATTGCACCAATTGAATGCTTTGTGTGGAAGTCGTGAATGGTTTGGTCCAGGGAGTAGAATAATCATCACAACTAGAGATATGCATATACTTAGAGGGAGAAGAGTTGACAAAGTGTACAAATTGAAAGGAATGAATGAAAGTGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCAACTCCTACAGAAGATTTTTCTGAACTTTCTAGAAATGTCATTGCATATTGTGGGGGATTGCCGCTAGCTCTTGAAATCCTTGGTTCCTATTTGTTTGATATGGAGTTAATGGAGTGGAGGATTGTATTGGAGAAACTCAAGAAAATTCCTAATGATGAAGTACATGAGAAGTTAAAAATAAGTTTTGATGGTTTAAATGATGATACCGAGAGGGAAATATTCCTTGACATAGCTTGTTTCTTTGTTGGGATGGATCGAAATGATGTTATGAATATACTAAATGGGTGTGGACTTTTTGCTGAAAATGGAATACGTGTCCTTGTAGAGCGTAGTCTTGTTATTGTTGATGGAAACAATAAGCTTGAAATGCATAATTTGCTGCAAGACATGGGAAGGGAAATCATCCGTGCAAAATCACCAAAGGAGCCTGAGGACCGTAGCAGGTTATGGCTTGATGAGGATGTGCTTGATGTTTTATCCAAAGAAAGTGGAACAAAAGCTGTTGAGGGATTGACTTTGATGTTGCCAAGGACCAATACCAAATGTTTTAGCACTAAAGCTTTTAAAAAGATGAAGAAACTCAGGTTGCTTCAACTTGCTGGTGTTCAACTTGATGGAGATTTTAAGAACCTTTCAAGAGATTTGAGATGGCTATGTTGGCATGGATTTTCCTTAAAATGCATACCGACAAACTTTTATAAAGCAAGTTTAGTTTGCATTGAGTTAGAAAACAGCAATATCAACGTTCTGTGGAAAGAGGCCCAGATGGAAAAACTTAAAATTCTCAATCTTAGTCATTCTCATTCTTTGACACGGACTCCAGACTTTTCAAGCTTACCGAATCTTGAAAAGTTAATACTCATAGATTGTCCAAGACTATCTGAGGTTTCTCATACCATTGGACATCTCAGGGAAGTCGTCTTGATAAATTTGAAAGACTGTGTTAGCCTTTGTAACCTTCCAAGGAGCATCTATAAGTTGAAATCTTTAAAAACACTTATTCTTTCTGGATGTTTGATGATTGACAAGTTGGAAGAGGACTTAGAACAAATGAAATCTTTGACAACCTTGATTGCAGACAATACTGCCATAACAAGAGTGCCCTTTTCTATAGTACGGTCAAAAAGCATTGGATATATTTCTTTGTGCGGCCATGAAGGATTCACGCGTGATGTATTTCCTTCTATCATTTGGTCTTGGATGTCACCCACAAATAATCCCTCGTGCCTAGTCCAATCTTATGTGGGCATGTCATCTACTATTTCTTTTAATGTACCAAATAGTAGTTCCTACGATCTACTAACTATTTCAAAGAGCTTCCAAAGCTTAGAAGTCTTTGGGTGGAATGCAACTCAGAGCTTCAGCTATCTCGAGATACTAGAATAA 3648 0.4265 MEVREGTTRVTTLKSDTPTVLRQSMAEARRRSHRETTPLHVAATAFGRPDGIMHEACIKSHRSSSNPLVSRALELCFGLALRRLPTWRNRSSSVKPPISSALMGFLERARAQPQLNNWYPVAGIDLIKVELEELMMSVLDDHDVRRVMRKATFSYLAVKASIRQMRYLHLTPTESERRLEELTVNILQRPKRRNPIIVGELEPHDAFQEVMTKLERTMFANVIHLENELPSDEARVLATLEELGELIEKCSRAQWVLVDLGDLKWLVELQPVGCGVGLGVVAEIGTWVSKFAQRGAGNLSLLGSASFNTCLRCQVYYPTMEKDWDLQVLPIATRAPVSGVFSGKYEVFLSFRGEDTRASFTSHLYASLQNAGINVFKDDESLPRGDQISSSLLQAIEQSRICVVVFSRNYAQSQWCLKELKKIMDCRGTIGQIVVPVFYDVAPSEVRHQTGEFGKAFQKLIDRNFIKEDDFVQLSNMAVGEDEVELEHILRGISREEDDVQGWREALREAASISGFVVLNSRNESESIKNITENVTRLLDKTELFIADNPVGVECRIQDMIHLLNHKLSNKVVIVGIWGMGGIGKTTIAKAIYNKIGRNFEGRSYLAQIREVWGEDDGQLLLQQQLLFDIDNQMKTKIPNVESGKNILKERLRHKRILLILDDVNKLHQLNALCGSREWFGPGSRIIITTRDMHILRGRRVDKVYKLKGMNESESIELFSWHAFKQATPTEDFSELSRNVIAYCGGLPLALEILGSYLFDMELMEWRIVLEKLKKIPNDEVHEKLKISFDGLNDDTEREIFLDIACFFVGMDRNDVMNILNGCGLFAENGIRVLVERSLVIVDGNNKLEMHNLLQDMGREIIRAKSPKEPEDRSRLWLDEDVLDVLSKESGTKAVEGLTLMLPRTNTKCFSTKAFKKMKKLRLLQLAGVQLDGDFKNLSRDLRWLCWHGFSLKCIPTNFYKASLVCIELENSNINVLWKEAQMEKLKILNLSHSHSLTRTPDFSSLPNLEKLILIDCPRLSEVSHTIGHLREVVLINLKDCVSLCNLPRSIYKLKSLKTLILSGCLMIDKLEEDLEQMKSLTTLIADNTAITRVPFSIVRSKSIGYISLCGHEGFTRDVFPSIIWSWMSPTNNPSCLVQSYVGMSSTISFNVPNSSSYDLLTISKSFQSLEVFGWNATQSFSYLEILE 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01377 1188 Pfam NB-ARC domain 560 777 IPR002182 GO:0043531
Pste6g01377 1188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 537 804 IPR027417 -
Pste6g01377 1188 SUPERFAMILY Toll/Interleukin receptor TIR domain 344 460 IPR035897 -
Pste6g01377 1188 Pfam TIR domain 344 461 IPR000157 GO:0007165
Pste6g01377 1188 Gene3D - 709 793 IPR042197 -
Pste6g01377 1188 SUPERFAMILY L domain-like 898 1146 - -
Pste6g01377 1188 SMART till_3 344 513 IPR000157 GO:0007165
Pste6g01377 1188 ProSiteProfiles TIR domain profile. 343 539 IPR000157 GO:0007165
Pste6g01377 1188 SMART AAA_5 571 711 IPR003593 GO:0016887
Pste6g01377 1188 Gene3D Ribonuclease Inhibitor 889 1142 IPR032675 -
Pste6g01377 1188 ProSiteProfiles Clp repeat (R) domain profile. 7 168 IPR004176 -
Pste6g01377 1188 Gene3D - 335 469 IPR035897 -
Pste6g01377 1188 PRINTS Disease resistance protein signature 744 758 - -
Pste6g01377 1188 PRINTS Disease resistance protein signature 574 589 - -
Pste6g01377 1188 PRINTS Disease resistance protein signature 651 665 - -
Pste6g01377 1188 PRINTS Disease resistance protein signature 981 997 - -
Pste6g01377 1188 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 345 1106 IPR044974 GO:0006952
Pste6g01377 1188 SUPERFAMILY "Winged helix" DNA-binding domain 779 886 IPR036390 -
Pste6g01377 1188 Gene3D - 9 168 IPR036628 -
Pste6g01377 1188 Gene3D - 517 703 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01377 Pste-Chr6 5958276 5965240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01377 342 1098 WRKY Transcription Factor Family AT4G12020 30.206 2.42e-81 291