Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01375 atggatttgaagtcctctcatgtttctcctgttctcactgacccggttcccgtgaataagtcaaggcttcgaatgcattctagtttgctagcttattcccagcaagattcaccagtaccaatctctcccgggaagtgctcaagaagcaattcaaggaaaagtacggggagcgtcgatgatgtaaggtccaacggttggttggatgccatgaaggcttcttctcctccaaggaagaagttgcttaaagggtccagtgctcaggttgcttctattgactatgacattgaagactactattcatggatgcttcaatatccttcagcgctagactcttttgagaaaattatggacctcgcaacggataagaagattgcaatgtttctagattatgatggcacactttcaccaatagtagatgatccagattgtgcctttatgtccgaatctatgcgtgcaaccgtgagaagtgtggcaaaatatttccccacagcaatcatcagcggaagaagccgtgacaaggtttttgatctagttaaactaacagaactctactacgctggtagtcatgggatggacattattggccctattagtgagactttatcaaaaaatcacccagattgtgtcaagtctactgaccatcagggaaaggaaacaactctctttcaacctgctagagaattcctgcccatgattgatgaggtttttagaaccctcgtcgagattactaaagatatacaaggcgcaatagttgaaaatcacaaattttgcgtttctgtacattaccgtaatgtagaggaaaataattggacaacgattggacaacgggtccatgacgtattaaaaaattaccctcgcttacgttcaactcatggacggaaggttttagaagtccgtcctgtgattgattggaataaaggaaaagctgttgaatttttacttgaatctctagggttaaccgataggaatgatgtgcttcccatctacattggagatgataatactgatgaagatgcattcaaggtgctacgagacagcaatcaaggttatgggattttggtttcatcggttaggaaagaaagcaacgccttctactctctccaagaccctaatgaggtcatgaaatttctccaactcttggtgaactggaagagacaagaaagtatgtatgggaagaagtaa 1182 0.0 MDLKSSHVSPVLTDPVPVNKSRLRMHSSLLAYSQQDSPVPISPGKCSRSNSRKSTGSVDDVRSNGWLDAMKASSPPRKKLLKGSSAQVASIDYDIEDYYSWMLQYPSALDSFEKIMDLATDKKIAMFLDYDGTLSPIVDDPDCAFMSESMRATVRSVAKYFPTAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPISETLSKNHPDCVKSTDHQGKETTLFQPAREFLPMIDEVFRTLVEITKDIQGAIVENHKFCVSVHYRNVEENNWTTIGQRVHDVLKNYPRLRSTHGRKVLEVRPVIDWNKGKAVEFLLESLGLTDRNDVLPIYIGDDNTDEDAFKVLRDSNQGYGILVSSVRKESNAFYSLQDPNEVMKFLQLLVNWKRQESMYGKK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01375 393 NCBIfam trehalose-phosphatase 122 381 IPR003337 GO:0003824|GO:0005992
Pste6g01375 393 FunFam Trehalose 6-phosphate phosphatase 225 301 - -
Pste6g01375 393 Gene3D - 222 393 IPR023214 -
Pste6g01375 393 Gene3D - 124 212 IPR023214 -
Pste6g01375 393 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 45 388 IPR044651 GO:0004805|GO:0005992
Pste6g01375 393 MobiDBLite consensus disorder prediction 34 61 - -
Pste6g01375 393 MobiDBLite consensus disorder prediction 34 62 - -
Pste6g01375 393 NCBIfam HAD-IIB family hydrolase 126 345 IPR006379 -
Pste6g01375 393 FunFam Trehalose 6-phosphate phosphatase 231 390 - -
Pste6g01375 393 CDD HAD_TPP 125 375 - -
Pste6g01375 393 FunFam Trehalose 6-phosphate phosphatase 124 214 - -
Pste6g01375 393 SUPERFAMILY HAD-like 125 385 IPR036412 -
Pste6g01375 393 Pfam Trehalose-phosphatase 127 370 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01375 Pste-Chr6 5953579 5961596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01375 122 380 Trehalose Biosynthesis Gene Families AT1G70290 27.273 2.11e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01375 6 5953579 5961596 Pste6g01375 6 5953579 5961596 ECH