Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01367 CTAAATTTGAGAGGGTTTTGAAACGGTGGAGTTGGTAGTATCCTGAGAGTGGAAAAAGGAGGTGGGTGGGAACTATAGTGGTGCAAGCATGGGTTACTTTGACCTGAACATACCCTATCCCGAACCCTCCTCCGCCAACAAGGTCAGCGAGCAAGGTAACCGTACGAGGTTGGCGGTGAAGGCCATGGAGTTGGGTTACACCGGAATCGCTTACAACCGCACGATCAGGGGCGTGATGTCCGATCAGCACCGTTGCTCCATCTCTCCCCTGACACTTTCCTCTCTCCTCAACGTCCTTCCCTCCCTCTCCTTGTCCGCCAATCTCCACCGTCGCCTTCTCCGTATCCCACTCTCCACTCCCTTCCGTCAGTACACGCGCCTCACCGTTTGCGTCGATTCCACCTCCCAGTCCCACCCACTCAATTCTGCTAACCCCATTTTGAAAACCTACGATTTGGTCGCTGTTAAGCCTTTCAATCAGACTGCCTTTGATCTTGCATGCCACACAATGGAGGTCGATATTATCTCCATTGATTTCTCAGCTAAATTGCCATTTAGATTGAAGCAGCCTATGGTTAAAGCAGCTACTCAGCGTGGGGTTTATTTTGAAGTTACATACTCTTCTCTTTTTGCTGATATCCAATTAAGGAGACAGTTAATTTCCAGTGCCAAGTTGTTAATGGATTGGACTCGGGGACAAAACATTGTATTTTCAAGTGCTGCTCCTACAGTGAATGAGCTTAGAGGACCTTGTGATGTTGCAAACTTGTTGTCATTATTTGGGCTCTCGAAGGAGCGAGCTAATGCAGCTATTTCTAAAAACTGTAGGATTCTTTTGGCTAATTCCTTAAGGAAAAAACGATTTTACAAAGAGGCAATTAGAGTAGAAGTTTTATCATCAGATGCAGCATCATCGCATTCTAAGGAAGATCAGTTCCAAGAGTTACTAAAGTGGGATCCAGTCTCCAGTGGTGAAGGTGATATACTGTTGGATGATGTGCAAAAAGCTTCGCCAGCCTCCTGTAAAGCATCAAAAACTGCAAAAGCCATTGACTTTGTTTCAGTGGTCAACAGCCTTCCATCTCATGGTTTTCAAATCAAGAATATCTCACCTGCAAATAATGCTTTCCCTGTCTGTGAAGTTAATAAGATAAATTTCCTGCCTGTTGCCAAAAAAGTAAATCAGTCAACACCTGTATCTAACAACTTAACTGAGCAGTCCAACATACTTGATGTTTGTCCTGATCAAGATGAAAACACCTTATCAGATTCCATAACAAAAAATCATATTTTGAGTCGTGACAATAATGGTATGAAAAATATACATAGCCGAACTACTGAAGCTGTCGATTTTAAGGAGATAAACATTTCGACATCCATGGACTCTGTTTCAATGTTTGAGACTATTCCACCTCATGGTATTCAAGTCAGGGATTTCTTACCAGCAAATAATGCTTTACCTGTCTTCCTCGATAACAAGGTAAACTTCCTTCCTGTTGCTCAAAAAATAAATCAATCAACACCTATAGTTGACAACATAACTTTGCAGCCAGATAAACTTGATGTTTGTCCTGAGCATGATGAAAGCTCTCAATCACTGAAACAAAGTGATGATATTTTGGAGAAAAATTCACATGATGGAATTACCAAAGCTTTCAATTCTAAGGAGATGGAAATTTCAACAAATGCTACAAAATTGGGAGTCGAAGGTTTTATTGATTCACTTGAAGATTTCAACTCGTTTGAAGCAAAAGCTCTTGATTCACAATCAAACTTGTGCATCTCAAGCAATATGTTGGATACTATAAAACCTGAAAATGGGAAACATAATAGTTTGAAAAGTTCTAATGTTAATTTCAATGAAAATATTGGCAAGATTCACGAAGCTTTACCAAATGAAGATTTAAAAATTGCAAAGCAAACAGTCTTGGAGTTAAACACATCTATTACTGATACGCCAATGGAGGATAAGCTGTTTGACAAACAAAAAACTTATGCACTTGAACTTGATGAGATGCAACAGCTAACATCTGATGATGAGATGACGTTAGAAGATAATTCCCCAGCTGCAAAACATTTATTGCCAAATGTTATAACGAAAGATAAAAAGCTGGGTGAAGTGAGCACTGATTCTAGCCAATTTGCCTCAGTGCATTCTGATTCAGGTGGATTGAGAGTGAAGCGAAGGACACCTCTGGGACTATCTCTATTCCCCTTCAAAAGATTGCTGAATCCTATACCCTTTAAGAAGAAAGACTGTGGAGCGCCTACAAGTACTTCAACAGGTACTTGCAATTTCACAGCTGATAATTTATCGAAGGATCTCCTTTCCACACAAGATATACTTGCCACTACCTCCCTGAAATCAATTACTTCTTTCTCTGATGAATCACCTCTTTATCAAACTGCAAGAGTCTTCACTGGATCCTCAAAACGAGGCCCTAGATTTACCTATCAAAAATACAATTTGAGTGCTGCAATTTTCACTGTTACCATGCACGATCATATCCAACATGCAGAAAGATCCAGTCATGAAGACACCCTTGTTATCTCCTTTGTCCCTTCAGACAATTCCACTGCTTTTGTGATTGCCATTGAGGTTGTGTCTGTCCCTGATGACCTAATTGTTGATGATGCTTTTACATTAGATCCATTAGCAGCACTGGAGACAGTTTGGAGGGTTAACATGGATGGTCCTACTGTGACCCCTCGTAATGACACCCTTCAAAACCAGATCAAAGTTTCCTTTTGCAACCCAACCTTGCCTCAGTTGTTACTAATATTAAGGTATGAGAAAGGTGGGCAAGCAATAGAAAACACTGCTCTGCCTACTGTTAATGGGACACTCAGACAGATGAACTCAACCACCGATTCCCTCTGTAAAGTTCTTAATCAACTCTACTTCAATGTTTATATTTACTCCAAGTTGGCTGCCTTGAGTGCCGATCCCGGTGTTACTAGCAATAATGCTTTGGGTGTTCCATATTATAAGGATCTGGTTACAGCCTTGGCTGTCAGCAATACACTTCGAGTAAGTATTGTCCTTTCTGATGCAAATACGGATTTTCCTAATGCCATTTTGAATAGGCTGGAGATCATCAAAATGAACAATTCTATGGGCAGTCTCATCCTAGGGTCTGTGGCTAGTACTTCTGGTTCAAGTTCTAACAAGATTGGCATGATTGTGGGTGTGAGTGTTGGGAAAAGAATGTTGTCACTTGTCACTGCAAAGGCAATCAAAGACATGGTTCCTTTATCCATCAATAATGGAACTACTTCTCATACCATGGGAAGCAAATATTCTAATGACACAACACTTAGTACTGCTTCAAACTTCAAGTACGGAGTTCCTTTTGTGGCAGTTCAGGATGCTACAAACAGTTTTTATGAGAGTTGGGTTATTGAGATAGGTGGTTTCGGAAGAGTGTACAAGGGAGAGTTAAGTGATGGCACAAAAATAGCGGCTAAGAGGGGGAATCCACAGTCCCACCAGGGACTTGCAGAATTCCGAACTGAAATTGAAATTTCCCTCATCGCCAAAGCAGTTATTCACTGTGATGTGAAGTCTGCAAATATCCTTCTTGATGAGAACCTAATGGCTAAAGTTGCTGATTTTGGATTATCAAAGACGGTGCCTGAATTGGACCAGACACATGTGAGCACAGCGGTCAAAGGTAGTTTTGGGTACCTTGACCCAGGAATGGACAAGGAAATGGCAGAAGAAAGGACAATTTTTGGAGAAACTGCTGAGAAATGCTTGGCTGATTGTGGTGTGGACAGGCCTTCTATCGGAGATGTCTTGTGGAATTTGGAGTATGTTCTACAACTTCAAGAGGCTGTGGTTAACAATATGATTGGTGAACTCTCTCCACAGGTCAACAATTTCAACCAGGATGCAAGTGCTTCTGCTACACAATTTGCAGGTTCAAGCCTGGATGATCTGTCAGGTGTTTCTCACAGCTGTATGGGGTTGGTTGCCCCTTTGCATAGCAGTGCTAGCTGGGACGGTGGAGAGCCGCATGGAGACAGCTAG 4033 0.4166 MGYFDLNIPYPEPSSANKVSEQGNRTRLAVKAMELGYTGIAYNRTIRGVMSDQHRCSISPLTLSSLLNVLPSLSLSANLHRRLLRIPLSTPFRQYTRLTVCVDSTSQSHPLNSANPILKTYDLVAVKPFNQTAFDLACHTMEVDIISIDFSAKLPFRLKQPMVKAATQRGVYFEVTYSSLFADIQLRRQLISSAKLLMDWTRGQNIVFSSAAPTVNELRGPCDVANLLSLFGLSKERANAAISKNCRILLANSLRKKRFYKEAIRVEVLSSDAASSHSKEDQFQELLKWDPVSSGEGDILLDDVQKASPASCKASKTAKAIDFVSVVNSLPSHGFQIKNISPANNAFPVCEVNKINFLPVAKKVNQSTPVSNNLTEQSNILDVCPDQDENTLSDSITKNHILSRDNNGMKNIHSRTTEAVDFKEINISTSMDSVSMFETIPPHGIQVRDFLPANNALPVFLDNKVNFLPVAQKINQSTPIVDNITLQPDKLDVCPEHDESSQSLKQSDDILEKNSHDGITKAFNSKEMEISTNATKLGVEGFIDSLEDFNSFEAKALDSQSNLCISSNMLDTIKPENGKHNSLKSSNVNFNENIGKIHEALPNEDLKIAKQTVLELNTSITDTPMEDKLFDKQKTYALELDEMQQLTSDDEMTLEDNSPAAKHLLPNVITKDKKLGEVSTDSSQFASVHSDSGGLRVKRRTPLGLSLFPFKRLLNPIPFKKKDCGAPTSTSTGTCNFTADNLSKDLLSTQDILATTSLKSITSFSDESPLYQTARVFTGSSKRGPRFTYQKYNLSAAIFTVTMHDHIQHAERSSHEDTLVISFVPSDNSTAFVIAIEVVSVPDDLIVDDAFTLDPLAALETVWRVNMDGPTVTPRNDTLQNQIKVSFCNPTLPQLLLILRYEKGGQAIENTALPTVNGTLRQMNSTTDSLCKVLNQLYFNVYIYSKLAALSADPGVTSNNALGVPYYKDLVTALAVSNTLRVSIVLSDANTDFPNAILNRLEIIKMNNSMGSLILGSVASTSGSSSNKIGMIVGVSVGKRMLSLVTAKAIKDMVPLSINNGTTSHTMGSKYSNDTTLSTASNFKYGVPFVAVQDATNSFYESWVIEIGGFGRVYKGELSDGTKIAAKRGNPQSHQGLAEFRTEIEISLIAKAVIHCDVKSANILLDENLMAKVADFGLSKTVPELDQTHVSTAVKGSFGYLDPGMDKEMAEERTIFGETAEKCLADCGVDRPSIGDVLWNLEYVLQLQEAVVNNMIGELSPQVNNFNQDASASATQFAGSSLDDLSGVSHSCMGLVAPLHSSASWDGGEPHGDS 1314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01367 1314 Pfam RNase P subunit p30 4 245 IPR002738 GO:0008033
Pste6g01367 1314 Gene3D Transferase(Phosphotransferase) domain 1 1152 1276 - -
Pste6g01367 1314 Gene3D - 78 253 - -
Pste6g01367 1314 Pfam Protein kinase domain 1151 1203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01367 1314 SUPERFAMILY Protein kinase-like (PK-like) 1075 1209 IPR011009 -
Pste6g01367 1314 ProSiteProfiles Protein kinase domain profile. 1004 1314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01367 1314 SUPERFAMILY PHP domain-like 2 250 IPR016195 -
Pste6g01367 1314 FunFam Polymerase/histidinol phosphatase-like protein 84 253 - -
Pste6g01367 1314 PANTHER RIBONUCLEASE P SUBUNIT P30 512 723 IPR002738 GO:0008033
Pste6g01367 1314 Gene3D Phosphorylase Kinase; domain 1 1060 1151 - -
Pste6g01367 1314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1153 1165 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01367 Pste-Chr6 5904725 5912388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01367 1150 1291 Receptor kinase-like Gene Family AT3G46290 49.309 1.49e-45 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pste6g01367 RNase_P_p30 1.6e-52 CL0034