Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01343 GGAGACTTCATGAGACCCTTTTTCGCTCTTCACCTTTCACTTCACCCAATCTAAACCAAGTTCTAAGTTGCGTGTTCCTGTTATCAGAAACATGTAGCACTAAACCCAAGTTGTCATCAAAGTTTCATACAATATCATATACATTGTGTGTGATTTTCTTATGTTAAGGTTGTCCGGAGTTTATATTTGTTGATTCAATTCGTCGACAAGAAAACCTTGCTTTGATATTTGATTGGTTCTGGTGAGAGTTTTCCTTTGATACTTGTGGTTGTCGAAGTTTGGTTTGTCCTTGTTGGGAATAACAATGGCTAATGAAGGAAACAAAAGCAATGACTTCTATAGGATCTTGGGATTGAACAAGGAGTGCACCGAATTGGAGCTAAAGAATGCGTATAAGAAACTTGCAAAGAAATGGCACCCGGATCGTTGTTCAGCGACCGGGAATTCAGAGTTAGTGGAAGAAGCTAAGAAGAAATTCCAGGAAATCAGGGAAGCCTATTCTGTTTTATCTGACGCCAACAAGAGGTTAATGTACGACGTAGGAGTCTACGACAGTGATGACGACGAAAACGTAAGTAACTTACCTTACCTCACACCATCTTCTACAGTTGCCATGCCTTTCTAA 625 0.4 MANEGNKSNDFYRILGLNKECTELELKNAYKKLAKKWHPDRCSATGNSELVEEAKKKFQEIREAYSVLSDANKRLMYDVGVYDSDDDENVSNLPYLTPSSTVAMPF 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01343 106 CDD DnaJ 10 70 IPR001623 -
Pste6g01343 106 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Pste6g01343 106 Coils Coil 51 71 - -
Pste6g01343 106 PANTHER PUTATIVE, EXPRESSED-RELATED 1 89 - -
Pste6g01343 106 SUPERFAMILY Chaperone J-domain 7 81 IPR036869 -
Pste6g01343 106 PRINTS DnaJ domain signature 12 30 IPR001623 -
Pste6g01343 106 PRINTS DnaJ domain signature 53 73 IPR001623 -
Pste6g01343 106 PRINTS DnaJ domain signature 30 45 IPR001623 -
Pste6g01343 106 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Pste6g01343 106 Gene3D DnaJ domain 1 85 IPR036869 -
Pste6g01343 106 SMART dnaj_3 9 73 IPR001623 -
Pste6g01343 106 Pfam DnaJ domain 10 78 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01343 Pste-Chr6 5776686 5777611 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01343 12 78 C2H2 Transcription Factor Family AT1G74250 44.118 1.05e-10 55.1