Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01328 atgatgagaaagtcacagaagaatcccatgtgtataaacttgaaattggtgcggtgttttggacaaggaaccaaagaattgtgtttcctaaggtggaaagccaagtatgtagagttgggtcacaacctgatagaggtcacacccaagggacatttggcagtgtatgtgggtgaagaatgtgaagatgagaagcaacgtgttttggtacctgttgcttacttaaaccatccccttcttggaaagctattggaggatgcagagaaagtttacggcttcgatcatccaggtggaataaccataccctgccacgtttctgagttccagagagttcagaacattattgcctccaccggaggctaccacaaccgccttaccatttgttga 384 0.0 MMRKSQKNPMCINLKLVRCFGQGTKELCFLRWKAKYVELGHNLIEVTPKGHLAVYVGEECEDEKQRVLVPVAYLNHPLLGKLLEDAEKVYGFDHPGGITIPCHVSEFQRVQNIIASTGGYHNRLTIC 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01328 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 109 IPR003676 GO:0009733
Pste6g01328 127 Pfam Auxin responsive protein 45 112 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01328 Pste-Chr6 5718348 5718957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01328 48 108 Calmodulin-binding Proteins AT3G43120 52.459 7.46e-16 67.8