Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01326 TCTATTGTCTGACTATGCTAGAAAACATAATTAAGTTGTCTGAAACATTGTACCAATCTCCATGGACCACTAGTCACAAAGTAGACCTCTTGTTTTTCTTTCCCCATTCCATTGCCATGGCTGATTCTTTTTCCTTTGAGGGTGACTCCTCCTTCTCAAGCAATCACAGGCGACACTATCCAACACCAGTGAGTTATCACAGTGCGTCTGGCCCTGCCTCTGGCTCTTTCATACCATCCAGCTCGGTAAGCAATGCCACTTCCACAACCAGAAGAGCTCGCCGCAACCGAGTTCCTGCCACACCCTTTGCTTCAGATGATGACAATTCATGGCAAGAAGAGGTTTCATGGAATTTTGAGGCCACTGGATGGCGTGATTATAGCACAAACTTTGGTTCTGTTCTGAGTCCATGGCCTGCTAGCCCCCCATCTGGTCACAGCCGTATATTTCGTCGATCAGCCAATGACTACTACCTTTCAAGGACAAGTAGGTTCAGAGGTCTCGCAAGCTCTTCTTACGAACATTCTGGCTATGGTAGAGTTGAACTTCAGAGCTATGTTGCTCGGGACAATGATTATAGTTACTTGGACCCGCATAGTCAGCCTCGAGGATTATCAAAATTGGAGTTCACCCCAGCGAAGAGTAGTAGAAAAAGTAAGAGTAGTCCATTGGCTGAGGAAGATGAGCTTAGTATGATAGATTATAGCATAACAGAAGAACCTGCTACTTCACCTAATAGGAATGGTCAGGGTCTTGAATCCCCATATTTTAAACATGGTCATGGTGGGAATTGTTATGTTGGTAATGGACTACCATCACATGATAGTCGAGTTTATGGAAGTGGAGGTGGTTATAGTCACCACCATTACGTTGAGAAGTTTTCATCAGGATATGATGAAGAAGGTGAGGAGGATATGGATGAGGAAGATGCAAGGCCTCCAAAGGCTGTTGGGCTGTTTAGCTTGTTTAGGTACTCAACAAAGTGGGATTGGGTGCTTGTGTTTGTAGGGTGTTTAGGGGCTCTCATAAATGGAGGATCACTTCCTTGGTACTCTTATCTTTTTGGAAGCTTGGTCAATAAGATTTCAGAAGAAGCTGACAAAGACAAAACACAGATGATGAAGGATGTAGAGAAGGTATCAATTCTTTCTTACCCTCTTTTTTCTTGGTCAAATCTTTACATATGGAGTGAAGTTGAAGCATATATATTTTCACTGTATTATTGTAGGAATTGTATATGTATATTTATGGCCGGGCTAGGTGCTCTTGTGGTAGTTGGAGCATATTTACAACTGTTGTTGTATATGAAAGATTGGCCACTAATTTTTGTTGATCTGAAATTGGCAGAAATCACATGTTGGAGGTTAGTTGGGGAGCGAGCTGCTCAAAGAATTAGAACTGAGTATCTAAGAGCGGTTCTTCGACAGGACATTACTTTTTTTGATACAGATATTAACACGGGTGATATTATGCATGGAATTGCAAGTGATGTGGCACAAATTCAAGAAGTTATGGGAGAGAAGGCTTCTTATAGGAAAGCTGGTAGCATTGCGGAGCAGGCCATTAGTTCAATTAGGACAGTGTTTTCATTTGTTGCAGAAAGCCAATTGGCAGGAAAATATGCTGAACTACTTAAAAAATCAGCTCCAATAGGGGCCAGAGTTGGTTTTGCTAAAGGTATAGGTATGGGAGTGATCTACTTAATAACATATTCAACATGGGCACTGGCATTCTGGTATGGCTCTATATTAATTGCCAAGAACGAACTTGATGGAGGTTCAGCTATAGCTTGTTTCTTTGGTGTCAATGTAGGGGGAAGAGGCTTGGCATTGGCACTTTCATATTTTGCACAATTTGCACAAGGGACTGTTGCAGCAAGCCGTGTATTCTATATTATAGAGAGAATCCCTGAGATTGATCCCTATAGCCCTGAGGGTAGGAAGCTTTCTGGTGTTCGTGGAAGGATTGAGTTAAAAAGTGTTAGTTTTGCATACCCATCCCGTCCTGATTCTCTTATACTTCATTCCCTTAGTTTGGTATTACCATCTTCAAAAACTGTGGCCTTGGTCGGTGCCAGTGGTGGGGGAAAGTCCACTATCTTTGCTCTTATAGAGAGGTTTTATGACCCTATTGAAGGTATTATCACCTTGGATGGTCATGATTTGAGGACATTGCAAGTAAAGTGGCTACGTGACCAGGTTGGTATGGTTGGTCAGGAGCCAATTCTCTTTGCCACATCTATATTGGAAAATGTGATGATGGGGAAAGATAATGCCACCAAGGAAGAGGCAATTGCTGCTTGCATTGCTGCTGATGCCCACAGTTTCATCTCTAACCTACCTCTAAGCTATGACACTCAGGTAGGGGACAGGGGTACTAAACTCTCAGGAGGTCAAAAGCAGAGAATTGCATTGGCTCGAGCGATGATCAAAGATCCTAAAATCCTTCTTCTTGATGAGCCTACTAGTGCTCTTGACGCTGAGTCAGAGTCAGCAGTCCAGCGTGCCATTGACAAGATATCTGCAGGCCGAACAACCATTGTGATTGCTCATAGGATAGCCACAGTAAAGAATGCTCATGCCATTGTGGTTCTTGAACATGGTTCTGTCTCGGAGATTGGTGACCATCACCAGCTTATGGCAAAAGCAGGAGCATACTACAACCTTGTCAAGCTTGCCACCGAAGCAATTTCAAAACCTCAAGCTATAGAAAATGGCATGCAAAATGCTAATGATTTATCCATCCATGATAAATCAATTCCTGGTTTATCAGAATCAAGATATATAGTTGATATCCCGAGGCCCAAAGACTTGATATATATGCAGGAGGAGGAGAAAGAAGACATGGGAGATAAGCAAGACAAAAAGCCAAGAAAATACAGACTTTCTGAATTATGGAAACTGCAAAAGCCTGAGCTTGGGATGCTATTTTCAGGACTTCTTCTAGGAATGATTGCGGGTGCTATTCTGTCTCTTTTTCCATTGGTTTTAGGCATATCCTTGGGAGTATATTTTGGTCATGACACTCGTAAGATGAAAAGAGATGTTGCGCACCTTTGTTTAACACTCGTTGGCCTTGGATTTGGTTGCATACTTTCCATGACAGGACAACAAGGTTTGTGTGGCTGGGCTGGATCAAAGCTGACACAAAGGGTTAGAGACCTCTTGCTTCAATCCATCCTGAAACAAGAACCTGGGTGGTTTGATTTTGAAGAAAACTCCACTGGAGTTTTAGTGTCAAGGCTCTCGTTAGACTGTGTTAGTTTTCGATCAGTGCTGGGTGACAGATTCTCAGTCCTTCTTATGGGGTTGAGTTCAGCTGCTGTTGGTCTTGGTGTGTCCTTTGCCTTCAATTGGAAACTAGCCCTTGTGGCAGCTGCTGTAACTCCTTTCACTCTTGGTGCCAGCTACATAAACTTGATCATAAACATTGGACCGAAAGTGGATAACGACTCTTATGCCAAAGCTAGTAATATTGCTTCTGGTGCAGTGTCAAACATTAGGACAGTTACTACATTTTCTGCCCAGGAACAGATAGTTATGTCCTTTGACAGAGCCCTGTCAGAACCTAGAACAAAATCATTACGAAGTTCACAACTTCAAGGTCTTATATTTGGGTTGTTTCAAGGTTCAATGTACGGATCATACACCTTAACTCTTTGGTTTGGTGCATACCTTGTAGAACATAACAAAGCAAAACTTGGAGACGTGTTTAAGATTTTTCTCATTCTTGTTTTGAGCTCATTCTCTGTGGGACAACTTGCTGGTTTAGCACCAGATACTTCTATAGCCAGTACTGCAATTCCTGCAGTTCAGAATATCATAAAACGTAGGCCACTGATTGACACTGATAGAACAGAAGGTAGGATAGTAGACAAATCAAAGCCGTTCAACATAGAATTCAAGATGGTGACATTTGTATACCCATCTAGGCCAGAGGTGACTGTGTTGAGGGACTTCTGTTTAAAGGTCAAAGGTGGAAGCACAGTAGCCTTGGTGGGACCAAGTGGATCAGGAAAGTCAACAGTCATATGGTTGACCCAGAGGTTCTATGATCCTGATCAAGGAAAGGTTATGATGAGTGGAATAGATTTGAGGGAGATTGATGTGAAGTGGTTACGGAGGCAAATTGCTTTGGTAGGTCAAGAACCTGCATTGTTTGCTGGGAGCATAAGGCACAACATTGCATTTGGGGACCCTAATGCCTCATGGACTGAAATTGAAGAAGCTGCAAAGGAGGCTTACATCCACAAGTTCATCAGTGGCCTTCCTCAAGGTGGCCAGAAACAAAGAGTTGCTATAGCCAGGGCCATATTGAAGAAATCAAGGGTGCTTTTGCTTGATGAAGCAAGCAGTGCCTTGGACTTGGAATCAGAGAAGCACATCCAAGAAGCCCTTAAGAATGTTACCAAAGAGGCAACAACCATAATAGTTGCTCACCGTCTTTCCACAATCAGAGAAGCTGACAAGATCGCAGTCATGAGAGACGGGGAAGTGGTGGAGTATGGGAGCCATGACATTCTCATGGCTTCAAGTCAAAATGGCTTGTATGCTAGCCTAGTTCGAGCTGAGACT 4574 0.4294 MLENIIKLSETLYQSPWTTSHKVDLLFFFPHSIAMADSFSFEGDSSFSSNHRRHYPTPVSYHSASGPASGSFIPSSSVSNATSTTRRARRNRVPATPFASDDDNSWQEEVSWNFEATGWRDYSTNFGSVLSPWPASPPSGHSRIFRRSANDYYLSRTSRFRGLASSSYEHSGYGRVELQSYVARDNDYSYLDPHSQPRGLSKLEFTPAKSSRKSKSSPLAEEDELSMIDYSITEEPATSPNRNGQGLESPYFKHGHGGNCYVGNGLPSHDSRVYGSGGGYSHHHYVEKFSSGYDEEGEEDMDEEDARPPKAVGLFSLFRYSTKWDWVLVFVGCLGALINGGSLPWYSYLFGSLVNKISEEADKDKTQMMKDVEKVSILSYPLFSWSNLYIWSEVEAYIFSLYYCRNCICIFMAGLGALVVVGAYLQLLLYMKDWPLIFVDLKLAEITCWRLVGERAAQRIRTEYLRAVLRQDITFFDTDINTGDIMHGIASDVAQIQEVMGEKASYRKAGSIAEQAISSIRTVFSFVAESQLAGKYAELLKKSAPIGARVGFAKGIGMGVIYLITYSTWALAFWYGSILIAKNELDGGSAIACFFGVNVGGRGLALALSYFAQFAQGTVAASRVFYIIERIPEIDPYSPEGRKLSGVRGRIELKSVSFAYPSRPDSLILHSLSLVLPSSKTVALVGASGGGKSTIFALIERFYDPIEGIITLDGHDLRTLQVKWLRDQVGMVGQEPILFATSILENVMMGKDNATKEEAIAACIAADAHSFISNLPLSYDTQVGDRGTKLSGGQKQRIALARAMIKDPKILLLDEPTSALDAESESAVQRAIDKISAGRTTIVIAHRIATVKNAHAIVVLEHGSVSEIGDHHQLMAKAGAYYNLVKLATEAISKPQAIENGMQNANDLSIHDKSIPGLSESRYIVDIPRPKDLIYMQEEEKEDMGDKQDKKPRKYRLSELWKLQKPELGMLFSGLLLGMIAGAILSLFPLVLGISLGVYFGHDTRKMKRDVAHLCLTLVGLGFGCILSMTGQQGLCGWAGSKLTQRVRDLLLQSILKQEPGWFDFEENSTGVLVSRLSLDCVSFRSVLGDRFSVLLMGLSSAAVGLGVSFAFNWKLALVAAAVTPFTLGASYINLIINIGPKVDNDSYAKASNIASGAVSNIRTVTTFSAQEQIVMSFDRALSEPRTKSLRSSQLQGLIFGLFQGSMYGSYTLTLWFGAYLVEHNKAKLGDVFKIFLILVLSSFSVGQLAGLAPDTSIASTAIPAVQNIIKRRPLIDTDRTEGRIVDKSKPFNIEFKMVTFVYPSRPEVTVLRDFCLKVKGGSTVALVGPSGSGKSTVIWLTQRFYDPDQGKVMMSGIDLREIDVKWLRRQIALVGQEPALFAGSIRHNIAFGDPNASWTEIEEAAKEAYIHKFISGLPQGGQKQRVAIARAILKKSRVLLLDEASSALDLESEKHIQEALKNVTKEATTIIVAHRLSTIREADKIAVMRDGEVVEYGSHDILMASSQNGLYASLVRAET 1520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01326 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 643 887 IPR027417 -
Pste6g01326 1520 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 330 616 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste6g01326 1520 SUPERFAMILY ABC transporter transmembrane region 317 636 IPR036640 GO:0005524|GO:0016020
Pste6g01326 1520 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 974 1255 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste6g01326 1520 CDD ABC_MTABC3_MDL1_MDL2 651 888 - -
Pste6g01326 1520 SMART AAA_5 1321 1493 IPR003593 GO:0016887
Pste6g01326 1520 SMART AAA_5 678 879 IPR003593 GO:0016887
Pste6g01326 1520 MobiDBLite consensus disorder prediction 58 103 - -
Pste6g01326 1520 Gene3D - 1292 1519 IPR027417 -
Pste6g01326 1520 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 1145 1285 - -
Pste6g01326 1520 Gene3D ABC transporter type 1, transmembrane domain 926 1137 IPR036640 GO:0005524|GO:0016020
Pste6g01326 1520 Gene3D ABC transporter type 1, transmembrane domain 1144 1290 IPR036640 GO:0005524|GO:0016020
Pste6g01326 1520 Gene3D - 641 889 IPR027417 -
Pste6g01326 1520 MobiDBLite consensus disorder prediction 189 223 - -
Pste6g01326 1520 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 651 887 IPR003439 GO:0005524
Pste6g01326 1520 CDD ABC_6TM_Pgp_ABCB1_D2_like 961 1276 - -
Pste6g01326 1520 PANTHER ABC TRANSPORTER B FAMILY 504 887 IPR039421 -
Pste6g01326 1520 Pfam ABC transporter transmembrane region 502 598 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste6g01326 1520 Pfam ABC transporter transmembrane region 973 1242 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste6g01326 1520 Pfam ABC transporter 1313 1446 IPR003439 GO:0005524
Pste6g01326 1520 SUPERFAMILY ABC transporter transmembrane region 960 1277 IPR036640 GO:0005524|GO:0016020
Pste6g01326 1520 FunFam Multidrug resistance protein 1A 1284 1520 - -
Pste6g01326 1520 Coils Coil 1515 1520 - -
Pste6g01326 1520 CDD ABC_6TM_Pgp_ABCB1_D1_like 330 624 - -
Pste6g01326 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1289 1517 IPR027417 -
Pste6g01326 1520 Pfam ABC transporter 669 818 IPR003439 GO:0005524
Pste6g01326 1520 MobiDBLite consensus disorder prediction 58 90 - -
Pste6g01326 1520 FunFam ABC transporter B family member 1 641 889 - -
Pste6g01326 1520 ProSitePatterns ABC transporters family signature. 790 804 IPR017871 GO:0005524|GO:0016887
Pste6g01326 1520 Gene3D ABC transporter type 1, transmembrane domain 505 893 IPR036640 GO:0005524|GO:0016020
Pste6g01326 1520 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1294 1516 IPR003439 GO:0005524
Pste6g01326 1520 Gene3D ABC transporter type 1, transmembrane domain 309 504 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01326 Pste-Chr6 5715092 5722382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01326 301 1519 Calmodulin-binding Proteins AT2G36910 36.898 0.0 819