Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01316 GCTATTTTTCTCTCTCCATGCTTCCCTTCACACCATTCGCCAATTAATTATAACTCAACACAAAGCAACAAACAAACAAACCTCAACACAATTTCTCTCTCTATCTAACCCCAACAAACAACTCCTCTCTCTCTCTCTCTCTCCATCTCTACTTTCTCTCTCTAGGGTTTCCACACCAACTCTCTCACTCTCCCTCAGTTTACCTCGATTGTAGGGTTCCCTCTTCGCGCCAATTGCGTCACTCTCGTGATCGACGCACTCTCGATTCTCCTCGTTCCCCCTCGATTGCTTGCTCAGGTGTATAGCTCCTGGGAGCTGGGAGCGTGTGAGGGAAAGCGAAGCGAGGGTAAAGGGTTGTGGTGATTACTGATACAGTGATACACAAAGTTTGTTGTGGAGATTTATACTGTGGCGAGCGAATGTTGTTGCTTGATGCTTGATGATTGTTGCTATGGACTTGAATGCCTCGCCGGTTCCAGAGGAAGATGAAGATATTTTTGAGGAGAAGATACATGTTCAAGAGTATCATGCGCCTGAAGAACGCATAGAAACTGGAGCTGATATAGCACGCCGGGAGCGTGAAGAAAGAAAGAGACGGTTGAAGAGAGATCGACCGGATGACAGACCTTTACATGTGTCACAGTCGCCTGGATATGATCAGTTATTTCCCACTAAGAACCATAAATCATATGATAAAAGCAGACTTCCTCCCGGGTGGTTGGATTGTCCTTCATTTGGCCAGGAAATTTGTTACATGATACCTTCTAAGGTTCCACTTGGTGAATCGTTCAATGATTGCATTGCTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAGAGAGTTTTAGGGAGAAAACTTGGTCTGGTGATTGATTTGACAAATACCAGTAGATACTATCCTGTGACGGATTTAAAAAAAGAGTGCATCAAGCATGTTAAGATTCAATGCAGGGGGCGTGATTCTGTACCTGATAATTTATCTGTGAACCAGTTCGTCTATGAGGCCACACAATTTTTGTCACGGCAAAAGCACTCAAAGAAGTATATACTTGTTCATTGTACACATGGTCATAATCGTACAGGATACATGATCATCCACTATCTAATGCGTGGTATGTCAATGTCAGTTACTCAGGCAATAAAAATATTTTCTGAAGCTCGCCCACCAGGAATATACAAACCTGATTACATTGATGCGTTGTACACATTTTATCATGAGAAAAAGCCTGAAATGGTAGTCTGTCCTCCTACTCCGGAGTGGAAGAGATCTTCTGAATTTGATCTCAATGGCGAAGCTGTTCCAGATGATGATGATGATGGCGTACCAGGCCCTGATTTGCAGGAGAACCATGAGACAGATGCACGGATGACAAATGATGATATTTTAGGAGATGAGATACCTGCTGATCAGCAAGATGCATTGCGTCAGTTCTGTTACCAAACTCTTAAATTGGGTGTTGGGGCCAGGGGACACACACAATTTCCAGGTTCACACCCAGTTTCTCTCAACAGGGATAATTTGCAATTGTTACGACAACGCTATTATTATGCAACATGGAAAGCAGATGGCACAAGATATATGATGCTAATAACAATGGATGGTTGTTACTTGATTGATAGAAGTTTTAATTTTCGAAGGGTCCAGATGAGGTTTCCTTGCAGAAGTACAAATGATGGTTTGGGTGAGAAGACTCATCATTTCACATTACTTGATGGTGAGATGGTTATTGATACATTGCCAGATTCACAGAAGCAGGAGAGAAGATACCTTATATATGATCTAATGGCAATCAACCAAGTATCAGTAATAGAGCGACCCTTCTATGAACGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGGAATCATGAACGACACCATATATATCAGAGCAGAAATCCTTACTATAGATATGACCTGGAACCATTCAGGGCATGGATCTCAACCTTAATTGGTCATAAAATACTTTAAGCTTTGCTTCATTTCCCCCTTGGTGCTTCACTATTAATATGTTTGTAATGTTGTTTAGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACTGTCACAAAGCTTTTAAAGGAATTCATTAAAAGACTCTCACATGAAGCAGATGGTCTCATATTTCAGGGTTGGGATGATCCTTATGTACCACGAACTCATGAAGGACTATTGAAGTGGAAATATGCTAATCTGAATTCAGTTGATTTTCTTTTTGAGGTTGATGGTGATCGTGAGCTACTTTTTCTCAATGAACGGGGAAAGAAGAAACTCTTGGAAGGGAATAGGGTTGAATTCACAGATGAAGATCCCTCATTTTACTCTGGAAAGATCATAGAATGTACTTGGGATTTTGATAAATTGGAATGGAAGTTTATGCGAATCAGAACAGATAAATCAACTCCGAATGAGTTTAATACCTACAGGAAGGTGATGCGAAGCATAAGAGACAACATCACTGAGGAAGATTTGTTGAATGAAATAAGTGAGATCATTCGCCTTCCCATGTATGCCGACAGGATAAGAAATGATAGTAAAGCAAATCAACATGCCAATGTCGCAAGGCGAAGGTGATCGGTGGGGGGTTAGATCAGGCACTTTTATGCCTTCAATCTTTTCATTGGTGGTAGTGCGTACATCTAGTGAAAACAAGATCAAGTGTATCCGCTGATACTTGTCTCTGGGATTTATATCAAATTGTATTGGATTTGGCTATCTATTTTGGCCATCATCCAAAAGTTGCTTATATTATGTAATTAGTTAGTCCTTGCGATAAGTACTGCTGTGCTGCTGAGCTGTATGGTGCAGTTGGTATAGCTCAAATTCCGGCCTGAATCCATTTCCTATGGTTGTCCAGATCAAGAGAGTTAGGTTTAGAATCTCAATGTATATTATCAATTTTCTTTTAGTGATTCTAAGTTGTTCAAAGGGTAGCCTTTTCTTAGAGTCAAGTTCCATTACATGGGTAGAATTTCCCCTGTATGTGAATATTAATTTGAGTAGTAGTGTAGTAACAAGCCTTCCATTCTCTCTAATGTTCTGTGGATATGGAAGTTATGATGCCTTTAGGCCGGGTCATCAGTGCCTGAATCAGATTGTTACTTAGCATGTTTGACAGTACCCCTGTAACTGCTACTCATTCTACCCTTAGCCTTTGAAATCTACCATGTTACAGTTCTAGAAGGATGTGGAGGCAGAAAATTGTGTCAACTGTTTGCCATTGGTGAAAAAATGTGTATGGTTCGGATAAATGGAAGTGGAAAAGAAACCAGTGTTAATTTGCTAGCCTCATTTGCATGATGATGAATGACTAAATTAAGAACATTTCAACGGCAAACCACATGTAACAGTGAAAGTGAAACATTTTCATGTCCTTTCTTATTTTCAACAATTCTTTTTACATCTGAACTTTGTTTCCTACTGTCCCATTAACTTCGTATTTTATTTTCTAAAAGAATTCTTTGTTTAAGCTGGATTTGTAAACTTGGTGTTCACCCAAAGTTTACATGTAAATAAATTTTGGTTATGCAAGTGGTTAATGTTGAATGAGCA 3563 0.3985 MIVAMDLNASPVPEEDEDIFEEKIHVQEYHAPEERIETGADIARREREERKRRLKRDRPDDRPLHVSQSPGYDQLFPTKNHKSYDKSRLPPGWLDCPSFGQEICYMIPSKVPLGESFNDCIAPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYPVTDLKKECIKHVKIQCRGRDSVPDNLSVNQFVYEATQFLSRQKHSKKYILVHCTHGHNRTGYMIIHYLMRGMSMSVTQAIKIFSEARPPGIYKPDYIDALYTFYHEKKPEMVVCPPTPEWKRSSEFDLNGEAVPDDDDDGVPGPDLQENHETDARMTNDDILGDEIPADQQDALRQFCYQTLKLGVGARGHTQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRSTNDGLGEKTHHFTLLDGEMVIDTLPDSQKQERRYLIYDLMAINQVSVIERPFYERWKMLEKEVIEPRNHERHHIYQSRNPYYRYDLEPFRAWISTLIGHKIL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01316 514 MobiDBLite consensus disorder prediction 30 64 - -
Pste6g01316 514 FunFam mRNA capping enzyme, putative 314 509 - -
Pste6g01316 514 ProSiteProfiles Dual specificity protein phosphatase domain profile. 116 267 IPR020422 GO:0006470|GO:0008138
Pste6g01316 514 Pfam Dual specificity phosphatase, catalytic domain 141 261 IPR000340 GO:0008138|GO:0016311
Pste6g01316 514 PANTHER MRNA-CAPPING ENZYME 84 502 - -
Pste6g01316 514 Pfam mRNA capping enzyme, catalytic domain 355 491 IPR001339 GO:0004484|GO:0005524|GO:0006370
Pste6g01316 514 SMART dsp_5 123 263 IPR020422 GO:0006470|GO:0008138
Pste6g01316 514 CDD Adenylation_mRNA_capping 326 502 IPR001339 GO:0004484|GO:0005524|GO:0006370
Pste6g01316 514 MobiDBLite consensus disorder prediction 285 310 - -
Pste6g01316 514 ProSitePatterns Tyrosine specific protein phosphatases active site. 208 218 IPR016130 GO:0016311|GO:0016791
Pste6g01316 514 Gene3D DNA ligase/mRNA capping enzyme 307 507 - -
Pste6g01316 514 MobiDBLite consensus disorder prediction 30 86 - -
Pste6g01316 514 Gene3D Protein tyrosine phosphatase superfamily 65 284 IPR029021 -
Pste6g01316 514 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 186 255 IPR000387 GO:0016311|GO:0016791
Pste6g01316 514 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 89 278 IPR029021 -
Pste6g01316 514 FunFam mRNA capping enzyme family protein 85 299 - -
Pste6g01316 514 CDD RNA_5'-triphosphatase 92 258 - -
Pste6g01316 514 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 316 488 - -
Pste6g01316 514 PIRSF mRNA_capping_HCE 75 506 IPR017074 GO:0004484|GO:0006370|GO:0140818
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01316 Pste-Chr6 5668667 5685635 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01316 1 503 Protein tyrosine phosphatase (PTP) family AT3G09100 67.520 0.0 688