Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01311 atgggtggaaaattcctaagcctttgtctgctagttgttataataaatgtgagtgcggaatggaaagttaggaaggcaacaagagagttgatagaggggtcatgcaagggcacgaggtacccagcaaagtgcgtagaaagcctgatgggctacgcgggttcaattggtgaaagcgaagaaaaactagccatgagtgccctatcggtgagcgtgtggaagagccgttcatgcgcatcgtttgtggaaaagatggggagtgtgaagggaatgaaggcgagggagcggaatgcagtggaagactgcatagagaacatgaatgatagcctggagcgtcttagccagtcccttagggagcttgggcttgtggttgtcgggaaggccaagaggaaggacttcctctggcacatcagtaatgtccagacttgggtcagtgctgccatcaccgatcaggacacgtgtcttgactccttcgatgggccccacctcgatgccaaattgaaggctgccattaagcccagggttgtcgatgcttatcaagtcaccactaatgctcttgctttggttaatcgctttgcctccaagtacccttctgcttctgcttctgcttcactaccttaa 618 0.0 MGGKFLSLCLLVVIINVSAEWKVRKATRELIEGSCKGTRYPAKCVESLMGYAGSIGESEEKLAMSALSVSVWKSRSCASFVEKMGSVKGMKARERNAVEDCIENMNDSLERLSQSLRELGLVVVGKAKRKDFLWHISNVQTWVSAAITDQDTCLDSFDGPHLDAKLKAAIKPRVVDAYQVTTNALALVNRFASKYPSASASASLP 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01311 205 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 187 - -
Pste6g01311 205 FunFam Pectinesterase inhibitor 3 26 192 - -
Pste6g01311 205 SMART PMEI_2 26 187 IPR006501 GO:0004857
Pste6g01311 205 NCBIfam pectinesterase inhibitor domain 8 189 IPR006501 GO:0004857
Pste6g01311 205 CDD PMEI-like_3 34 193 - -
Pste6g01311 205 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 192 IPR035513 -
Pste6g01311 205 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 191 IPR035513 -
Pste6g01311 205 Coils Coil 102 122 - -
Pste6g01311 205 Pfam Plant invertase/pectin methylesterase inhibitor 30 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01311 Pste-Chr6 5646242 5647123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01311 26 188 Carbohydrate Esterase AT3G14310 26.220 1.88e-18 81.3