Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01294 ATAGCAGATTCAAGGAACATGCTTAGAAAACAGCCAAGCCCACCCATATTCTCTCACTTGGACCTCCCAAAACTTCCTACCATGAACTGAACAACTGGGTCACCCATACCCACCATCAAAGAGATCACTTTTATAAGCACTATTCCAATTTCACAGATTTTCCTGTGAGAATTTTTTGGTGGGCATCTCTTAAAAATGTCAAGTTTCCCCAACGCGGTATCGGAAGGACGGAGGTCCGGCAAGGCACCGGAAAAATCCACTTTTTCTCAGACTTGCAGCCTTTTGAGTCAGTTCTTGAAGGAGAAACGTGCTTCTGCTGATTCTACCCTTGGAATGGGTGGGAAAATGGAACCTAAAGCGAGTGCGAAGGATTTGTTAGGCAGCCTGCAAAACTCAGATGGGGCTTTGAAACTAAGCGCTTCAGCCATGGATTTTTTGCCCCAGCTTGTGGAAAACCCCTGCATTAAGAAGTCTAATGTTAGGTCACCGGGAACTGAATCCCCTCAATTGACAATATTCTATGCTGGAAAAATGTTGGTTTTTGATGCTTTTTCGCCCGAGAAGGCAACAGAGGTGATGGAGTTGGCCACCAAGTTGGCCTCGGACTCCACAGCCATGGAAGAGAGGCCCCCTAGTGCTCCTGTTAAAACAGAAAAATTGGCTGTGTCCAAAGTGCCTCAAACTAACACTTCCTCAGAAACCCCTAAGCCAGGAAGCCAAGGAGTTGGTTCAGATATGAGGTATCCAAGGAGAACTTCACTTCTAAAATTTCTTGAGAAAAGAAAAGAAAGGGTTAATGCAAGAGGGCCTTACCAAATTAACAACAAGCCAGAAGGAAGCAGTTCAGGGGGTGAACTTGAAGATCAGTGTTCCAAACAGTTTGACCTTAACTTGTAGTAATTTAGCTCATCATGAACTTACGATATACAGGCTCTGGTCAACCAAAAGCTCCTAACTATATGATTGTAGGCCTTTCGAAGATTGCTGTGGCCTTCATACGTATTTATAATATATATTTGTATGTATAATTATTTCATCAATTAGGTCCACCTCTGCGGACCAAACCAGAGATAAATTTAGTTTAACGACTGAGATTGATTAGTTTCAGAAAATTTAATGTCTCTGTGTGCATTATTTTGATAATTTTTAGTGAATACAAGTCGTTTTTACACATGATATTAATTTGCTTAGTTCATGTTTGGTTGGTATCATTTGGGTGGAAATTGAATTGATTTTTCTTATTTTATTGAGATCATAAGCATAATTGATCCTACTCAGAGCCACGGTTGCTTGTAATATCCACTCTTTTTAAAAATGCATCTATCTTTCTAGAGC 1335 0.4082 MSSFPNAVSEGRRSGKAPEKSTFSQTCSLLSQFLKEKRASADSTLGMGGKMEPKASAKDLLGSLQNSDGALKLSASAMDFLPQLVENPCIKKSNVRSPGTESPQLTIFYAGKMLVFDAFSPEKATEVMELATKLASDSTAMEERPPSAPVKTEKLAVSKVPQTNTSSETPKPGSQGVGSDMRYPRRTSLLKFLEKRKERVNARGPYQINNKPEGSSSGGELEDQCSKQFDLNL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01294 233 Pfam Jas motif 185 207 IPR018467 -
Pste6g01294 233 ProSiteProfiles Tify domain profile. 98 133 IPR010399 -
Pste6g01294 233 MobiDBLite consensus disorder prediction 157 174 - -
Pste6g01294 233 SMART tify_2 98 133 IPR010399 -
Pste6g01294 233 Pfam tify domain 101 131 IPR010399 -
Pste6g01294 233 MobiDBLite consensus disorder prediction 208 233 - -
Pste6g01294 233 MobiDBLite consensus disorder prediction 136 233 - -
Pste6g01294 233 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 213 IPR040390 -
Pste6g01294 233 MobiDBLite consensus disorder prediction 1 24 - -
Pste6g01294 233 MobiDBLite consensus disorder prediction 187 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01294 Pste-Chr6 5585954 5588625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01294 8 217 Tify Gene Family AT1G19180 33.750 1.31e-24 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pste6g01294 tify 4.9e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01294 6 5585954 5588625 Pste6g01294 6 5585954 5588625 ECH