Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01283 ATGGCCATAGCTCCGGCAATAATCCTCCACCCAACTCTCATCATCATCGTCACTTTGCCTGTGATATATTCCATGACAGAAGCTGAAGCCTTGGTGAGTCTCAAAAGCTCTTTTTCCAATGCTGAACTTTTGAGTAGTTGGGTGGTTGGTTCTCCACCTTGCAGTGAAGAGGATCAATGGGAAGGTGTTGTTTGCAACAATGGCCTTGTCACGGGGCTTCGCCTTGGAGGTTTGGGGTTAGTAGGGGAAATACACGTTGATCCATTGCTAGAACTCAAGGGTCTTCGAACTATAAGCCTCAACAACAATTCTTTCACAGGTTCCATTCCAGAGTTCAACCGAATTGGCTTCTTGAAAGCCTTGTATTTGCAAGGAAACAAGTTTTCTGGGGATATTCCTTTGGAATACTTCCAGAGAATGAGATCTTTGAAGAAAGTGTGGCTTTCTGACAACGAATTCACTGGAAGTATTCCATTATCATTGGTCGATGTTCCTCAGCTTATGGAGTTGCACCTTGAAAACAACCAGTTTAGTGGAGCCATTCCTGATATCAGAAACCCGTTGTTGGTGAAATTCGATGTTTCCAACAACAAATTGGAAGGTGAAGTTCCACCTGGTTTGATGAGATTCAATCAAAGTTCCTTTGCAGGGAATTCCGGTCTTTGTGGCGACAAGTTTGGGAAATCATGTGAAAAGGTAAAAGAGAGCCCAGGTCCTAGTCCGGATGATGCTTTAGATAATGTTGGTAATGTATCCGTGCCACATAGTAGTAGCTCATTGGAGGTTGTTGGCATTATAGTTGCAAGTCTAGTGCTTGTCTCAATAGTTGTGTTTTTTATCGTGAGATCAAGGAGAAAGAAAGAGGAGGAGAGTTTTGTACTTGGACAAGAAATTGATGATGATGCAGTGGAAGTTCAAGTAACTGCGCCAGTGAAAAGGGATTTGAATCCTACTACAAGTGCAGCAATAAAGAAATCATCGTTCAGAAGGGGATCTGTATCTTCTCAAGGTAAAAACGTTGGAGAGCTTGTGATGATCAATGATGAGAAGGGTGTGTTTGGGTTGCCAGATTTGATGAAGGCAGCCGCCGAAGTTCTGGGAAATGGAGGCTTTGGATCTTCTTATAAAGCTGTGATCGCTAATGGAGTGGCTGTGGTGGTGAAAAGGACTAGAGAGATGAATGTTCTCGAGAAAGACGCTTTTGATGCAGAGATGAGGAAGCTTGCGAAGCTTAAACACTGGAATATATTAACCCCTTTAGCTTATCATTTCAGAAAGGATGAGAAACTAGTGATCTCTGAAAATCTACGTGATAGGGGACCATCGCATGCGGAGCTGGATTGGCCTGCTCGTATGAAGATTGTACGTGGAATTGCTGAAGGGGTGCGTTACCTTCACAAAGAACTTGCTTCCTATGATCTCCCACATGGGAATCTCAAGTCCAGCAATGTTCTCCTTGGACCAGACAATGAACCAATGCTGGTAGATTACGGGTTTAGCCACATGGTTAACCCTTCAAGCGTTGCACAGACACTGTTAGCTTACAAGGCACCTGAGGCAGCAACATATGGCCAAGTTTCACGTAGTTGTGATGTTTACTGTCTCGGCGTTGTCATACTTGAGATACTCACTGGGAAGTTCCCTTCCCAATATCTCAGCAATGGAAAGGGTGGAACTGATGTGGTCAAATGGGTTGACACAGCAATCTCCGAAGGAAGGGAATCACAGGTGTTTGATCCTGAGATTACAAATTCTAGGAATTGCCTAGGTGAGATGGAGCAACTCCTCCACATTGGTGCTGCATGCACTGAGAGCAATCCTATGCGGCGGATAGACATGGGGGAAGCAATTAGAAGGATAAAGGAGATAAAAACCGAGGGTGGCCACGAATCAAGAACAGTAGAGGTCTTACCATCTCTTAGAGATGACTATGCAGACTCTCAGGTTCACCAATCACAGAGGAGTCGTGGATCAAACAGCTTTGGAAGGCGGGATAATAATGAATTTAGCAGCTCCTAG 2019 0.4433 MAIAPAIILHPTLIIIVTLPVIYSMTEAEALVSLKSSFSNAELLSSWVVGSPPCSEEDQWEGVVCNNGLVTGLRLGGLGLVGEIHVDPLLELKGLRTISLNNNSFTGSIPEFNRIGFLKALYLQGNKFSGDIPLEYFQRMRSLKKVWLSDNEFTGSIPLSLVDVPQLMELHLENNQFSGAIPDIRNPLLVKFDVSNNKLEGEVPPGLMRFNQSSFAGNSGLCGDKFGKSCEKVKESPGPSPDDALDNVGNVSVPHSSSSLEVVGIIVASLVLVSIVVFFIVRSRRKKEEESFVLGQEIDDDAVEVQVTAPVKRDLNPTTSAAIKKSSFRRGSVSSQGKNVGELVMINDEKGVFGLPDLMKAAAEVLGNGGFGSSYKAVIANGVAVVVKRTREMNVLEKDAFDAEMRKLAKLKHWNILTPLAYHFRKDEKLVISENLRDRGPSHAELDWPARMKIVRGIAEGVRYLHKELASYDLPHGNLKSSNVLLGPDNEPMLVDYGFSHMVNPSSVAQTLLAYKAPEAATYGQVSRSCDVYCLGVVILEILTGKFPSQYLSNGKGGTDVVKWVDTAISEGRESQVFDPEITNSRNCLGEMEQLLHIGAACTESNPMRRIDMGEAIRRIKEIKTEGGHESRTVEVLPSLRDDYADSQVHQSQRSRGSNSFGRRDNNEFSSS 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01283 672 Gene3D Transferase(Phosphotransferase) domain 1 433 635 - -
Pste6g01283 672 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Pste6g01283 672 FunFam Nuclear pore complex protein NUP107 24 183 - -
Pste6g01283 672 SUPERFAMILY Protein kinase-like (PK-like) 364 624 IPR011009 -
Pste6g01283 672 ProSiteProfiles Protein kinase domain profile. 360 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01283 672 MobiDBLite consensus disorder prediction 628 672 - -
Pste6g01283 672 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Pste6g01283 672 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 625 IPR046959 -
Pste6g01283 672 SUPERFAMILY L domain-like 27 210 - -
Pste6g01283 672 Gene3D Ribonuclease Inhibitor 188 223 IPR032675 -
Pste6g01283 672 Gene3D Ribonuclease Inhibitor 25 185 IPR032675 -
Pste6g01283 672 Gene3D Phosphorylase Kinase; domain 1 331 432 - -
Pste6g01283 672 Pfam Protein kinase domain 364 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01283 672 MobiDBLite consensus disorder prediction 650 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01283 Pste-Chr6 5529407 5531870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01283 13 623 Receptor kinase-like Gene Family AT3G42880 42.767 3.26e-175 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste6g01283 Pkinase 3.1e-25 CL0016