Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01276 GAAGTGTAGTAAACCCGCAATGGCACAGAGCCAGCACCTCCTCCTGGATCCATTCTAAATCTCAATCTCCAAACCCTAGAAGATTAAATTTCCCCCTTTTCTCTCTCTCACTTTCCTTTTCAAAAACCAACCCTTTCCGCTGCGATTCGATCTCTGGAGTTGCTTCCTTTCCGCGATTTCGATGTGAAACTTGAGGTCGCGGATTTGGTAGTTGACATTGAAGTGATTGGTGTGAAGTAGCAGAGTTGAATTGGTGCTGGCAATGCCATTGGTGTGGTTGGTGAGGAATTATTCGGTGATTTTTCAGATACCGAAAAAACACAATGTCTTGGGCAGGCCCTGAGGATATTTACCTTTCTACTTCACTTGCTAGCTATCTTGACAAGAAACTTCTTGTATTGCTGAGAGATGGTAGAAAACTCATGGGGACACTTCGGTCTTTTGATCAATTTGCTAATGCAGTTCTTGAGGGTGCCTGTGAGAGGGTTATTGTTGGTGATCTGTATTGTGACATCCCTTTGGGTCTCTATGTGATTCGTGGAGAAAATGTTGTTCTAATTGGTGAGCTGGACTTGGAGAGGGAGGAACTTCCCGAACACATGACACGTGTTTCTACAGCAGAAATCAAGAGGGCACAGAGAGCAGAAAGGGAGGCTTCTGATCTGAAAGGAACTATGAGGAAAAGAATGGAATTCCTTGACTTTGACTATTCGCAAACAACATTCAGATTAGAGAAACTTCTTGTATTGCTGAGAGATGGTAGAAAGCTCATGGGGACACTTCGCTCTTTTGATCAATTCGCTAATGCAGTTCTTGAGGGTGCCTGTGAGAGAGTTATTGTTGGTGATCTGTATTGTGACATCCCTTTGGGTCTCTATGTGATCCGAGGGGAAAATGTTGTTCTAATTGGTGAGCTGGACTTGGAGAGGGAGGAACTTCCCGAACATATGACACGTGTTTCTACAGAAGAAATCAAGAGGGCACAGAAAGCTGAAAGGGAAGCTTCAGATCTGAAAGGGACTATGAGGAAAAGAATGGAATTCCTTGACTTTGACTAGTCAACCTTCACTCATCCTTCACCTTCCTGTCCGCAAATATTATAGCGGCTTATTCTTCGGGTATTTTGTTTTGTTGTGGGAAGGTTGAGGACTGTCGGATTTTCTTTTGTAATACTAGCCCGAGCAATCAATACTATTATTCATTTGCTTTCAGAGAAATTGTCAATCCATATAGCATGATTTCAATTTGTAAACCAAATTCATGCTTCAAATTGTGCAAAATGGTTATGTTATAAATTCAATGCTTTGCGTCG 1312 0.423 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQRAEREASDLKGTMRKRMEFLDFDYSQTTFRLEKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTEEIKRAQKAEREASDLKGTMRKRMEFLDFD 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01276 244 Pfam LSM domain 14 80 IPR001163 -
Pste6g01276 244 Pfam LSM domain 137 196 IPR001163 -
Pste6g01276 244 SUPERFAMILY Sm-like ribonucleoproteins 138 199 IPR010920 -
Pste6g01276 244 Gene3D - 12 131 - -
Pste6g01276 244 Gene3D - 132 241 - -
Pste6g01276 244 SUPERFAMILY Sm-like ribonucleoproteins 13 83 IPR010920 -
Pste6g01276 244 CDD LSm1 138 198 IPR034104 GO:0000956
Pste6g01276 244 FunFam U6 snRNA-associated Sm-like protein LSm1 12 125 - -
Pste6g01276 244 SMART Sm3 129 197 IPR001163 -
Pste6g01276 244 SMART Sm3 13 81 IPR001163 -
Pste6g01276 244 CDD LSm1 12 82 IPR034104 GO:0000956
Pste6g01276 244 FunFam U6 snRNA-associated Sm-like protein LSm1 130 241 - -
Pste6g01276 244 ProSiteProfiles Sm domain profile. 126 201 IPR047575 GO:0003723
Pste6g01276 244 PANTHER LSM1 8 122 IPR044642 -
Pste6g01276 244 ProSiteProfiles Sm domain profile. 10 85 IPR047575 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01276 Pste-Chr6 5487659 5496786 Dispersed