Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01257 atggatccaatatcggcgcatggtcattcccttcccccgccttttcactcaagggatctccatctgcaccaccagccacagcagcatcaattccaaaccttaaaccaagccacggaggacgagcacagcgggagtagcggagcgaaaagggaacgggaagacaacaacaacaacggcggcaacgaaggtgcaggagaggctgagataacaagaagaccaagaggaagaccagcggggtcgaagaacaagccgaagccacccattataatcactagggacagcgcaaacgccatgagaacccacatgatggaggtggcagaaggttgcgacatcgtggaaagcgtgtcggaattcgcaaggaaacgacagagaggggtttgcatcatgagtggcacgggcacagtgaccaacgtaactctgaggcaacccccagcttcgggtgccgtggtgaccctccacggaaggttcgagatcctgtccctctctggatcgttccttccgccaccggctccaccggctgcttccggtttgaccatatatttgtcgggtgggcagggacaggtggtgggaggaagcgtggttgggacactgcttgcttcggggcctgtggtcatcatggctgcttccttcagcaacgctgcttatgagaggcttcctttggaggatgatgagcctccgctgggtatccaaggtggttcaattggctcacccggtggaagtggtcttggtcagtcacagcttttaggaggaggaggaggagatgcaactgctccacttttccatggtttgcctcctaaccttctcaattctgttcaaatgccttctgagccattctgggcttccacccgcccacctttctga 861 0.0 MDPISAHGHSLPPPFHSRDLHLHHQPQQHQFQTLNQATEDEHSGSSGAKREREDNNNNGGNEGAGEAEITRRPRGRPAGSKNKPKPPIIITRDSANAMRTHMMEVAEGCDIVESVSEFARKRQRGVCIMSGTGTVTNVTLRQPPASGAVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLSGGQGQVVGGSVVGTLLASGPVVIMAASFSNAAYERLPLEDDEPPLGIQGGSIGSPGGSGLGQSQLLGGGGGDATAPLFHGLPPNLLNSVQMPSEPFWASTRPPF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01257 286 CDD DUF296 99 166 IPR005175 -
Pste6g01257 286 MobiDBLite consensus disorder prediction 1 90 - -
Pste6g01257 286 Gene3D - 98 225 - -
Pste6g01257 286 MobiDBLite consensus disorder prediction 43 57 - -
Pste6g01257 286 MobiDBLite consensus disorder prediction 228 248 - -
Pste6g01257 286 ProSiteProfiles PPC domain profile profile. 95 233 IPR005175 -
Pste6g01257 286 SUPERFAMILY AF0104/ALDC/Ptd012-like 95 225 - -
Pste6g01257 286 MobiDBLite consensus disorder prediction 26 42 - -
Pste6g01257 286 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 212 IPR005175 -
Pste6g01257 286 FunFam AT-hook motif nuclear-localized protein 98 225 - -
Pste6g01257 286 PIRSF ESCAROLA 13 286 IPR014476 GO:0003680
Pste6g01257 286 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 39 270 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01257 Pste-Chr6 5420315 5421595 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01257 1 286 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 54.242 2.71e-87 261