Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01238 GATAGAGGCATCATAATTCACAAAGTAGCCTTAGAAGAGAATGGAATTGACATCACTGAATTGGGTTTCAACGACTTGTTTGGCAGCCTTGGCCGTGGTCCTCCTCTTTCTCCGGCATGGGCTCCGGCGATACAATCTGCCCCCAGGCCCAAAGCCCTGGCCCGTCATAGGGAACCTTAACTTAATAGGTTCCCTACCACATCAGTCAATACACGAGCTCAGTAGAAAGTACGGACCCATCATGCACGTGTGGTTCGGATCCAATCCTGTGGTGGTCGGTTCCTCCGTTGAGATGGCTAAGGCTTTTCTAAAAACCCACGACGCCACCGTTGCCGGCAGGCCGAAATTCTCTGCAGGCAAATACACTACTTACAACTACTCCAACATCACTTGGTCCCAGTACGGGCCTTACTGGCGCCAGGCCCGTAGAATGTGCCTGATGGAATTATTCAGCGCTAAGCGCTTAGAGGAATACGAATACATTCGAAAAGAAGAGCTCCGTGCTCTTCTGAACCAACTCTACCATTCCAAGAATCCAATTTTATTAAAAGACCATCTTTCTAATCTTAGCCTCAACGTTATCAGCCGCATGGTGTTGGGGAAGAAGTACTTGGAAGAGTCCCAAGACGCCATCGTTTCCCCCGACGAGTTTAAGAAGATGCTTGATGAGTTGTTTTTGCTTAATGGGGTGTTGAACATCGGTGACTTCATTCCTTGGATTAATTTCTTGGACTTACAGGGTTACATCAAGAGGATGAAGGCCTTGACAAAGAAGTTTGACAGGTTCATGGAGCACGTTTTGGATGAACATATTCAGAGGAAGAAAGGGGTTACTCATTATGTTGCAAAGGACATGGTCGACGTTCTTTTGCAATTTGCCGAGGATCCTTCTCTTGAGGTCAAGCTTGAGCGACATGGAGTCAAGGCTTTTACCCAGGATCTAATAGCAGGTGGGACAGAGAGTTCAGCTGTAACAGTGGAATGGGCAATATCTGAGCTATTGAGAAGGCCAGAGATATTCAAGAAGGCAACAGAGGAGCTAGACAGGGTGATAGGGAGAGAAAGATGGGTAGAGGAGAAGGATATTACGAATTTGCCATACATTAATTCTATTGCTAAGGAAGCAATGAGGCTGCACCCTGTGGCACCAATGTTGGTGCCAAGACTAGCCAGAGAGGATTGCCAAGTTGGAGGGTATGACATCCCCAAAGGCACCCAAGTGCTTGTGAATGTGTGGACAATTGGGAGAGACCCTTCAATTTGGGACAACCCAAATGAATTCCATCCAGAGAGGTTTCTAGATAACCAAATTGATGTGAAAGGGCATGACTATGAGCTACTGCCATTTGGTGCTGGGAGAAGGATGTGCCCTGGGTACCCTCTTGGCCTTAAGGTTATTCAAAACAGCTTGGCCAACCTGTTGCATGGATTTAACTGGAGACTGCCTCATAATTTAACCAAGGAGGACTTGAATATGGATGAGATTTTTGGATTGTCTACTCCTAAGAAAATACCTCTTCAAGTAGTTGCTGACCCCAGGCTTCCACATCATCTTTATTCCCTCTGAACCCTCCGTTAAAGTTCTATATAAGGAATAAAGGGTCTTATAACGCTGTGGTGTCACTCACAGCTAATCTGTTCTTGTGAAACTATGTAACCCTTCTCTCTCTTTTTCTTCTAGTAATAATAATCATTATGTATAATTTTTGGTTATCAACATATTTCCCAACCTACTCACCAAATATATATATTCGGTAAGCTTAATTTTTGTCAAAAAGCCAAGACATTCCGTAAGCTTCAGTCCTTTCAGTTGCTAGTCCAAAGCTAAACAATTGTAGGCTGCTTGTCATCTTTCAAAAGATATGTGGAAATCAAATTCAGGTTTTCTACACCCACTTGAGCTATAATAAGCTTCTCTCTTTTATACATGGCGTTAAATTTTTA 1944 0.4408 MELTSLNWVSTTCLAALAVVLLFLRHGLRRYNLPPGPKPWPVIGNLNLIGSLPHQSIHELSRKYGPIMHVWFGSNPVVVGSSVEMAKAFLKTHDATVAGRPKFSAGKYTTYNYSNITWSQYGPYWRQARRMCLMELFSAKRLEEYEYIRKEELRALLNQLYHSKNPILLKDHLSNLSLNVISRMVLGKKYLEESQDAIVSPDEFKKMLDELFLLNGVLNIGDFIPWINFLDLQGYIKRMKALTKKFDRFMEHVLDEHIQRKKGVTHYVAKDMVDVLLQFAEDPSLEVKLERHGVKAFTQDLIAGGTESSAVTVEWAISELLRRPEIFKKATEELDRVIGRERWVEEKDITNLPYINSIAKEAMRLHPVAPMLVPRLAREDCQVGGYDIPKGTQVLVNVWTIGRDPSIWDNPNEFHPERFLDNQIDVKGHDYELLPFGAGRRMCPGYPLGLKVIQNSLANLLHGFNWRLPHNLTKEDLNMDEIFGLSTPKKIPLQVVADPRLPHHLYSL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01238 508 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g01238 508 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g01238 508 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g01238 508 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g01238 508 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g01238 508 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g01238 508 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g01238 508 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g01238 508 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g01238 508 PANTHER CYTOCHROME P450 98A9 3 507 - -
Pste6g01238 508 SUPERFAMILY Cytochrome P450 34 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g01238 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Pste6g01238 508 Pfam Cytochrome P450 34 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g01238 508 Gene3D Cytochrome P450 28 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g01238 508 CDD CYP71_clan 65 493 - -
Pste6g01238 508 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g01238 508 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g01238 508 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g01238 508 FunFam Cytochrome P450 84A1 25 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01238 Pste-Chr6 5299874 5303386 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01238 9 508 Cytochrome P450 AT5G07990 41.553 1.13e-140 413