Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01215 ATGATCATGGAACCACATGCAACATCAGATCACACTCTGGACTGGTTTGAAAGTTCTCTCTCTTTCTTTCCATTTCCACAATTCTTAGATGATCCATATAACTCTAGTGACATTCAAGAGTATCAGTTGTGGGATCAAGACATAACCAGCCACTATCAAACTGATACCAATACCAGTTCCCCTAATGCCACCAACATTGGTACTAACACTACCCTTCAGCCTTGTGGCTCAAACAACCTACCACTTTCTGATTTGCCCAAGAAAAGAAGTGCCACTGACGAGTCAAGTCTCAAACCACCACAAAACCACAAGCACAAGAAGATCAAGAGCCGTCCAATGAATAATGAAGCAGATAATGGAGATGCAGAAGGTACAACAACAGTTAGAAAATCTGGTGGGAATAAGAAAGGTGGAACTAAGGCCAACGGAAATAACTGTAACAATAAGGAGGGTAGGTGGGCTGAACAGTTGCTGAACCCTTGCGCTGCAGCCATAACAGGTGGAAACCTGAACCGTGTACAACACCTCTTGTATGTTCTCCATGAGTTAGCATCATCAACTGGTGATGCTAACCACAGGCTTGCAGCACATGGTCTTAAAGCACTGACACACCATCTATCTTCTTCTCCAACTTCTACCTCTTCAGGGTCTATAACTTTTGCATCTACCGAGCCACGGTTCTTCCAAAAGACACTACTCAAGTTCTATGAGGTTAGCCCTTGGTTTTCCTTTCCTAACAACATAGCAAATGCTTCCATCCTTCAAGTTCTTGGTGATGAAACAAATAATTCACGCCCCCTTCACATCCTTGACTTTGGAGTCTCTCATGGTATGCAATGGCCAACTTTTCTAGAGGCCTTGAGTCGCAGACCTGGTGGGCCTCCTCCACTGGTTCGCCTCACCATGGTCACTGCTTCCTCCTCTGAAAATGATACCCCATTTTCTATTGGTCCTCCTGGTGATAACTTCTCTTCTAGACTCCTTGGTTTTGCTCAGTCCTTGAACGTTAATTTGCAGATAAACAAGCTAGATAATCTTCCATTACAAACACTGAATGCTCAGAGTATAGACACCTCCCCGGATGAAATATTTGTTGTATGTGCACAGTTTAGGTTGCATCAGTTAAATCACCATAATCCTGATCAAAGAAGTCAGTTTCTGAAAGTGTTGAGGAACATGGAGCCCAGAGGAGTGATACTAAGTGACAACAACATGGAATGTTGTTGCAATTGTTGTGGGGATTTTGCCACCGGGTTTTCTCGGCGAGTGGAATACTTATGGAGGTTTTTGGACTCAACAAGCTCAGCATTCAAGGGCCGTGAGAGTGATGAAAGGAGAGTGATGGAAGGTGAGGCTGCGAAGGCATTGACAAACCAACGTGAGATGAATGAAGGGATGGAGAAATGGTGTGAGAGAATGAAAGAAGCAGGGTTTGTGAGGGAAATATTTGGAGAGGATGCAATAGATGGAGGTAAAGCTTTGCTGAGGAAGTATGATAGTAATTGGGAGATGAAAGTGGAAGATGAGAATACTAGAATGGGACTATGGTGGAAGGGGCAACCTGTTTCTTTCTGTTCTTTGTGGAAGCTGGATGAGAAAGATCAGAGCTCAACATTCACATCATGA 1626 0.4379 MIMEPHATSDHTLDWFESSLSFFPFPQFLDDPYNSSDIQEYQLWDQDITSHYQTDTNTSSPNATNIGTNTTLQPCGSNNLPLSDLPKKRSATDESSLKPPQNHKHKKIKSRPMNNEADNGDAEGTTTVRKSGGNKKGGTKANGNNCNNKEGRWAEQLLNPCAAAITGGNLNRVQHLLYVLHELASSTGDANHRLAAHGLKALTHHLSSSPTSTSSGSITFASTEPRFFQKTLLKFYEVSPWFSFPNNIANASILQVLGDETNNSRPLHILDFGVSHGMQWPTFLEALSRRPGGPPPLVRLTMVTASSSENDTPFSIGPPGDNFSSRLLGFAQSLNVNLQINKLDNLPLQTLNAQSIDTSPDEIFVVCAQFRLHQLNHHNPDQRSQFLKVLRNMEPRGVILSDNNMECCCNCCGDFATGFSRRVEYLWRFLDSTSSAFKGRESDERRVMEGEAAKALTNQREMNEGMEKWCERMKEAGFVREIFGEDAIDGGKALLRKYDSNWEMKVEDENTRMGLWWKGQPVSFCSLWKLDEKDQSSTFTS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01215 541 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 129 517 IPR005202 -
Pste6g01215 541 MobiDBLite consensus disorder prediction 52 144 - -
Pste6g01215 541 MobiDBLite consensus disorder prediction 87 101 - -
Pste6g01215 541 MobiDBLite consensus disorder prediction 52 85 - -
Pste6g01215 541 MobiDBLite consensus disorder prediction 119 144 - -
Pste6g01215 541 Pfam GRAS domain family 155 529 IPR005202 -
Pste6g01215 541 ProSiteProfiles GRAS family profile. 145 529 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01215 Pste-Chr6 5175502 5177127 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01215 1 529 GRAS Transcription Factor Family AT3G13840 50.464 1.79e-174 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste6g01215 GRAS 1.3e-75 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01215 6 5175502 5177127 Pste6g01215 6 5175502 5177127 ECH