Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01206 atggtggaaaagacgaagaatagaaaggaagaggttgttactcgagagtacaccattaacctccacaagcgcctccatggctgtacatttaagaagaaagcaccgaaggctgtgaaggagataaggaagtttgcgcagaaggcaatgggaacaaacgatgtgagggtggatgtgaagctgaacaagtatgtgtggagtcaaggaatcaggagtgttccgaggaggattagggttaggattgcccgcaagaggaatgatgatgaagatgccaaagaagagttgtactctctcgtcacggtagttgagattcctaaggatgaactcaaaggcttgagcactaaggttattgatgatgaagattga 363 0.0 MVEKTKNRKEEVVTREYTINLHKRLHGCTFKKKAPKAVKEIRKFAQKAMGTNDVRVDVKLNKYVWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVEIPKDELKGLSTKVIDDED 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01206 120 PANTHER 60S RIBOSOMAL PROTEIN L31 2 119 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pste6g01206 120 SMART Ribosomal_L31e_2 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pste6g01206 120 Pfam Ribosomal protein L31e 11 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pste6g01206 120 ProSitePatterns Ribosomal protein L31e signature. 54 68 IPR020052 GO:0003735|GO:0005840|GO:0006412
Pste6g01206 120 Gene3D - 8 120 IPR023621 -
Pste6g01206 120 FunFam 60S ribosomal protein L31 6 120 - -
Pste6g01206 120 SUPERFAMILY Ribosomal protein L31e 11 92 IPR023621 -
Pste6g01206 120 CDD Ribosomal_L31e 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01206 Pste-Chr6 5113702 5118934 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01206 2 120 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 78.151 4.89e-66 193