Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01158 GGAAACTTGACGCCGCAACACTCCCATTTTCACCTTTTCTTTTCTCTCATCGGAGAGAATAGGGTGGCGCATGCACACACCTTTGGATTTGGACACAAAAGCCAACCCACTTATGAGTTATGACCCCTCTCTCTATATATATGTGCAGTGTGCAATGTCACACGTTATATGATGCATAGTTAGACACATAAGCCTCCAAGCCAAACCAAACCTCACACGTTGTAGAGCTGCATACATAGGGAGAGCTCAAATCTCAATGTCAATGGCCCTTCAGAGAGACTGAAAAAGGGTGGTGAGAGGAGCACATTCAATGAAGCTTTTGGTTTTTGAGTTTTTGGGAGTGGATCAAGTTGACTCTAGATCTTCAATTTGTTTGGTTGTTGCAAAGTGTCATCCTTTCTTCTGATTAATATCTTGGGTTGGTACTTGCTAGCGACTTCAACTTGGTTATCTTTTGTCACTAAAAAATGTTGACTTGCATTGCGTGTACCAAGCAACTCAATAATGGATCTCTGCGCCAAGAGGAAGAGGAAGAAGCTGTGCACACACCTAGCACCAAGCAAGCCATTAAGGCTCTCACTGCTCAGATCAAGGACATGGCAGTGAAGGCTTCTGGGGCATACAAGAGCTGCAGACCATGTTCAGGATCTTCAAATGGTAACAGGAATAGGAAGTATGCAGACTCGGATATGGGGTCAGATTCAGCAAGGTTCAACTGGGCATACCGCAGAACTGGGAGCTCCAATTCAACCCCAAGGATGTGGGGAAAGGAAATGGAAGGTAGTAGGGTGAAAGGGCTTTCCAGCGGGGAAGGAACACCAGCATCAGTGAGTGGACGGACTGAGTCAGTGGTGTTCATGGAGGAGGATGAGCCTAAGGAGTGGATTGCACAAGTGGAGCCTGGTGTGCTTATTACTTTTGTTTCACTGCCTCAGGGAGGGAATGATCTCAAGCGGATTCGGTTCAGTGATCACATGCTTTTCAAAGGCTGTCCAGATTCTAGATTGGCAGGATCTATCTTGTTTCTATTGTGCCTCTTTGGAGGACCTCAGCTTTGTTCCATTGTCAGTAAGTCATGCTTGGCTGGTGGTATAGTAGGTTGTCGTGAAATGTTTAATAAATGGCAAGCTCAGAGGTGGTGGGCAGAGAATTATGACAAGGTGATGGAGTTGTACAATGTTCAGAGGTTCAATCAGCAAGCAGTTCCTCTTCCAACCCCACCTAGATCTGAAGATGAGGTGAGCATACAGAGCTCAAAGATTGAATCCACTAGGAACAGTCCTGTTACTCCTCCACTGAGCAAAGAGCGCGCACTCCGTCATTTTCAGCACCCAATGGGAATGGGCTACTCCTCATCAGATTCACTGGATCACCACCAAATGCCATCAACACCCAACATTGCTGCTGCACCAAAGGCCCAAAGATCATCCCTTGATGCTGATGCTTCTGTAAGGACCAGTTCATCTGCAGAAGCAGAAGATCACTCTCCCCAGTTTTCAATCAGTAATGCCAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGTGTATACATCACTATCAGAGCACTCTCAGGTGGAACTAGAGAACTCAGACGTGTCCGCTTCAGCCGAGAAAGGTTTGGAGAAATGCATGCCAGATTGTGGTGGGAAGAGAACCGTGCTAGGATACAAGAACAATACTTGTGATGACCGTGACTATAGAAGAGCCTTTACAAAAACAACTGCTTCAGCAGGCTAACACAGTACAGCTAGAAAGCGCTTTACAACAGTGTTGTGCACTCTAGATCAATTTACCGGGGGATAAATTTGCATGTAACTGCAACTTTCAACTTTCTAGTTCTCTTTAGCTGTGGAGAAATGTAGATCTTGGGAAATATTAAACTATTATAGTCATATCTTAGTTTTAGTTAAAACTTGTTCCTGAAATGTCAGCCAGATGTTTTCCAAATTGTATGAATTTTAAACTGTTG 1978 0.4479 MLTCIACTKQLNNGSLRQEEEEEAVHTPSTKQAIKALTAQIKDMAVKASGAYKSCRPCSGSSNGNRNRKYADSDMGSDSARFNWAYRRTGSSNSTPRMWGKEMEGSRVKGLSSGEGTPASVSGRTESVVFMEEDEPKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSDHMLFKGCPDSRLAGSILFLLCLFGGPQLCSIVSKSCLAGGIVGCREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDEVSIQSSKIESTRNSPVTPPLSKERALRHFQHPMGMGYSSSDSLDHHQMPSTPNIAAAPKAQRSSLDADASVRTSSSAEAEDHSPQFSISNASDMETEWVEQDEPGVYITIRALSGGTRELRRVRFSRERFGEMHARLWWEENRARIQEQYL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01158 408 Pfam Transcription factor regulating root and shoot growth via Pin3 137 170 IPR013591 -
Pste6g01158 408 Pfam Transcription factor regulating root and shoot growth via Pin3 213 236 IPR013591 -
Pste6g01158 408 Pfam Transcription factor regulating root and shoot growth via Pin3 352 407 IPR013591 -
Pste6g01158 408 MobiDBLite consensus disorder prediction 90 123 - -
Pste6g01158 408 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 408 IPR044532 -
Pste6g01158 408 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Pste6g01158 408 MobiDBLite consensus disorder prediction 245 341 - -
Pste6g01158 408 MobiDBLite consensus disorder prediction 292 315 - -
Pste6g01158 408 MobiDBLite consensus disorder prediction 323 341 - -
Pste6g01158 408 MobiDBLite consensus disorder prediction 245 275 - -
Pste6g01158 408 ProSiteProfiles BRX domain profile. 353 408 IPR013591 -
Pste6g01158 408 ProSiteProfiles BRX domain profile. 137 237 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01158 Pste-Chr6 4845267 4849255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01158 1 408 Major Intrinsic Protein MIP AT1G31880 44.869 3.52e-96 290
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01158 6 4845267 4849255 Pste6g01158 6 4845267 4849255 ECH