Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01157 atgagcgacgacagcgagagtcgccaaaacggcgccgtcgcgacaccgatcgatttcgaagccctaagagtggtctccgccgtggggcgcggcgcgaagggcgtggtgttcctggcgaggaccggcgaccggccggcgagcgagtgcgtggcgctgaaagtgatatcgaaggcgctgatccttcagaagaaagcgaaaaacgacgaagaggagtataagagagtgtcgtttgaagagaaagtgctgcgtcgtttcgatcaccctctgttgccgaaactgagaggggttttggaaactgagaaggtcgttgcgttcgccattgattactgccacggtggcaacctccattctctacggaagagacagaccgagaaaatgttctccgatgatattataaggttttacgcagtggaattggttctcgcattggaatatttgcacaatttgggaatagtttatagagatttgaagccagaaaatgtgatgattcaagaaagcggtcacataatgttggtagatttcgatctctccaaaaagctaaaccctaaatccccaaactcgctgagtcacaacccgtccccgagtcccaactcattaagactcacaagaaaacaacgaccaacgcgattctacagtttctgtagctcaggaatctcaccgtgcgactcagactcggaacccccactcagagtcgactcagcgcgcagcaccgagtcagactcggtcgaaaaatccaactcgttcgtcggaacagaagaatacgtggcgcccgaaatcgtttccggaaaaggtcacggcttcagcgttgactggtggtcatttggcgtcgttttgtacgagatgttatacggaacgacgccgtttaagggcgcaaatcgaaaagaaacgttttaccgagtcttaacgaaggagccggagttaacgggagagaagacggcgttacgcgatttgatagcgcgattgctggagaaggatcctgaccgtcggatccacgtggacgaaatcaagggccacgatttcttcaaaggggtttggtgggacacggtgttgcacattgcgcggccaccttatattcccgaaagcgaggttgagaacaaagtggggttcaccaaaaacgacgtcgaattgttcgttgaagaggtcttttttccaactagtgatgaaaacgcagagaaaataaacaaaacggtgttggaaaagaagggtgataatgttgaaaacaacaaaacggtgtggattgacgaattgagtcatgttcccatcgagaagaatgacgatttttttattttttga 1293 0.0 MSDDSESRQNGAVATPIDFEALRVVSAVGRGAKGVVFLARTGDRPASECVALKVISKALILQKKAKNDEEEYKRVSFEEKVLRRFDHPLLPKLRGVLETEKVVAFAIDYCHGGNLHSLRKRQTEKMFSDDIIRFYAVELVLALEYLHNLGIVYRDLKPENVMIQESGHIMLVDFDLSKKLNPKSPNSLSHNPSPSPNSLRLTRKQRPTRFYSFCSSGISPCDSDSEPPLRVDSARSTESDSVEKSNSFVGTEEYVAPEIVSGKGHGFSVDWWSFGVVLYEMLYGTTPFKGANRKETFYRVLTKEPELTGEKTALRDLIARLLEKDPDRRIHVDEIKGHDFFKGVWWDTVLHIARPPYIPESEVENKVGFTKNDVELFVEEVFFPTSDENAEKINKTVLEKKGDNVENNKTVWIDELSHVPIEKNDDFFIF 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01157 430 Gene3D Transferase(Phosphotransferase) domain 1 236 360 - -
Pste6g01157 430 MobiDBLite consensus disorder prediction 220 246 - -
Pste6g01157 430 SUPERFAMILY Protein kinase-like (PK-like) 23 362 IPR011009 -
Pste6g01157 430 ProSiteProfiles Protein kinase domain profile. 22 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01157 430 PANTHER FLIPPASE KINASE 1-RELATED 15 366 - -
Pste6g01157 430 Pfam Protein kinase domain 240 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01157 430 Pfam Protein kinase domain 24 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01157 430 Gene3D Phosphorylase Kinase; domain 1 23 113 - -
Pste6g01157 430 Gene3D Transferase(Phosphotransferase) domain 1 114 183 - -
Pste6g01157 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Pste6g01157 430 FunFam Serine/threonine-protein kinase OXI1 114 182 - -
Pste6g01157 430 FunFam Serine/threonine-protein kinase OXI1 243 360 - -
Pste6g01157 430 SMART serkin_6 22 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01157 Pste-Chr6 4831815 4835073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01157 17 430 AGC Kinase Gene Family AT3G25250 56.872 4.85e-156 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pste6g01157 Pkinase 8e-33 CL0016