Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01135 ATGCCCCTAATCCATAACCGACACGCGTCAGTCCCTCGCTTCTTCTCCCACCAACGAATCCACCTCTTACTCCGGTTACCCCTCTCTCTCTTCTTACTTTCTCTCTGTCACCGTGAATCAATGCTCTCAACTTTTTATCTATATATTGCCTCTCTGATGCCGATGGGTGCCTCCAATTTTCCGGCAACCCTCAAACTCTCTGTCTCCGACGTCGATTTAGATTACTTTTCCGAATCCAGTGAAGAGGTTAATGTTCCGGGGGAGATTGATTGGCAAATGCTCGATAAATCCAAGTTTTTCTTCCTTGGTGCTGCTCTTTTCTCTGGGGTTTCTGCAACCCTTTACCCTGTTGTTGTGTTGAAGACCAGGCAGCAAGTGGCTCAGTCTCAAGTCTCTTGCCTCAACACTGCATTTTCGTTGATTAGGGGTGAGGGTTTTAGAGCATTGTACCGCGGGTTTGGGACTTCTTTGATGGGCACAATCCCAGCTAGGGCTCTTTACATGGCTGCATTAGAGGTTACCAAGAGCAGTGTGGGCACTGCCACTGTTAGGTTTGGTCTTGCAGAACCAACTGCTGCTCTAGTTGCCAATGCCGCTGCTGGCTTGAGTGCAGCCATGGCAGCTCAGCTTGTATGGACCCCTGTTGATGTTGTCAGTCAAAGGTTGATGATTCAAGGTGGTTGTGATTCCAGCAATCCTAAGGCTTCGGCTTGTCGGTACATCAATGGGATTGATGCCTTCAGGAAAATCTTGAGCAATGACGGTCTTAGGGGCTTGTATAGGGGTTTTGGGATCTCAATTTTGACCTATGCCCCTTCAAATGCAGTTTGGTGGGCTTCTTATTCTGTTGCACAAAGGATGGTTTGGGGTGGAGTTGGGTACTACTTGTGCAAGGGAAATGATAATGGAGCTAATAGTGCATTGAAGCCTGATACAAAGACTGTGATGGCAGTTCAGGGAGTCAGTGCAGCAGTGGCTGGTGGCATGTCTGCTTTGATCACCATGCCACTGGACACCATAAAGACAAGACTGCAGGTCTTGGATGGCGATGAGAACGGCCGTCGTGGACCAACAGTCATGCAGACATTGAGGAGTCTGGTTAGGGAAGGTGGTTGGACGGCATGTTATAGAGGATTAGGACCTAGATGGGCTTCAATGTCAATGTCTGCAACAACAATGATCACAACTTATGAGTTCCTCAAACGGCTCTCCGCCAAGAATCAAGAGGTTTTGACATGA 1239 0.4826 MPLIHNRHASVPRFFSHQRIHLLLRLPLSLFLLSLCHRESMLSTFYLYIASLMPMGASNFPATLKLSVSDVDLDYFSESSEEVNVPGEIDWQMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQVAQSQVSCLNTAFSLIRGEGFRALYRGFGTSLMGTIPARALYMAALEVTKSSVGTATVRFGLAEPTAALVANAAAGLSAAMAAQLVWTPVDVVSQRLMIQGGCDSSNPKASACRYINGIDAFRKILSNDGLRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGYYLCKGNDNGANSALKPDTKTVMAVQGVSAAVAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTLRSLVREGGWTACYRGLGPRWASMSMSATTMITTYEFLKRLSAKNQEVLT 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01135 412 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 81 409 - -
Pste6g01135 412 ProSiteProfiles Solute carrier (Solcar) repeat profile. 192 287 IPR018108 -
Pste6g01135 412 ProSiteProfiles Solute carrier (Solcar) repeat profile. 95 177 IPR018108 -
Pste6g01135 412 Pfam Mitochondrial carrier protein 194 288 IPR018108 -
Pste6g01135 412 Pfam Mitochondrial carrier protein 106 177 IPR018108 -
Pste6g01135 412 Pfam Mitochondrial carrier protein 318 407 IPR018108 -
Pste6g01135 412 Gene3D Mitochondrial carrier domain 98 410 IPR023395 -
Pste6g01135 412 SUPERFAMILY Mitochondrial carrier 92 400 IPR023395 -
Pste6g01135 412 ProSiteProfiles Solute carrier (Solcar) repeat profile. 314 403 IPR018108 -
Pste6g01135 412 PRINTS Mitochondrial carrier protein signature 323 345 IPR002067 GO:0055085
Pste6g01135 412 PRINTS Mitochondrial carrier protein signature 100 113 IPR002067 GO:0055085
Pste6g01135 412 PRINTS Mitochondrial carrier protein signature 260 278 IPR002067 GO:0055085
Pste6g01135 412 PRINTS Mitochondrial carrier protein signature 152 172 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01135 Pste-Chr6 4737176 4738988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01135 78 409 Chloroplast and Mitochondria Gene Families AT1G72820 74.184 4.43e-180 503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01135 6 4737176 4738988 Pste6g01135 6 4737176 4738988 ECH