Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01127 atgttgaaaacagacttaaaagaggaagactttctatgcctgttgccacccatggctattgagaacagtagacagtggctagggggacccttgtttcatccactaaaaaacactcttatactcttccaatcacatgttgatcaaccaagtgaggtgttgcaaaaatcccaactggatgccatagcctcttcctcttccagcgagattcacgatgctttgaatgataaagcctttcaagaactaatttgccaaattgattgttcctcaaataaagagaattcaaaaccaatagaagacttcaaagaactagcaagaaatgtagttgcttattgtggaggactaccactagctcttcgagtccttggttcttatttaattgggaggccaaagcagttagggcatagtgtgttgttaagaccggagaaaattcccaatgatcaagttcaaaagatattaagaataagctttgatggtttaagcgatcctatggaaaaggatatattcttagatgtgtgttgtttctttattggtaaagacagagcctatcttacagatatactaaatggttgtggattatgtgctgatattggaataacaattctcatacagcgtagtctcataacagttgaaaaggaaaacaaacttggaatgcatcatttgctacgagagacgggaagagggataatttgtggaagttcacgaactgaaccgtga 714 0.0 MLKTDLKEEDFLCLLPPMAIENSRQWLGGPLFHPLKNTLILFQSHVDQPSEVLQKSQLDAIASSSSSEIHDALNDKAFQELICQIDCSSNKENSKPIEDFKELARNVVAYCGGLPLALRVLGSYLIGRPKQLGHSVLLRPEKIPNDQVQKILRISFDGLSDPMEKDIFLDVCCFFIGKDRAYLTDILNGCGLCADIGITILIQRSLITVEKENKLGMHHLLRETGRGIICGSSRTEP 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01127 237 Gene3D - 72 160 IPR042197 -
Pste6g01127 237 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 73 230 IPR044974 GO:0006952
Pste6g01127 237 SUPERFAMILY "Winged helix" DNA-binding domain 146 233 IPR036390 -
Pste6g01127 237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 170 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01127 Pste-Chr6 4691646 4694493 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01127 98 234 WRKY Transcription Factor Family AT5G45050 38.129 5.24e-23 95.5