Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01121 GTAAACTTAGAGGTGGAAATGAGGAAACTAAAATTAGAACTGAAGAAAACAACAGAAAAGTATGGTATGGCTTGTCGAGAAGCTGTTTTGGCAAAGCAAAAGACAGTGCAACTTGAAAAGTTTTGGCACGAAAATGAACGCAATGTAGAAGAAGCTAGACTAGCTGAGGAGTCTGCATTGGCTTTGGCTGAAGTGGAAAGGCAGAAAGCCAAAACAGCTATGGAGTCCATAGAGATGTCACAACGATTAGCAGAAATGGAATCCCAAAAGAGGAAAGAAGTTGAATTAAGAGCTAGACATGAGGAAGAAGAAAGGAATCGAACATTGCACGAAGTTGTATGTAATAATATTCCTTATAGAAGGTATAAAATTGAAGAAATAGAAGTTGCAACAAATAACTTTAATAAATCTTTGCAAATTGGAGAAGGTGGATATGGTCCTGTTTTTAAAGGAGTGATTGATCATACTGTTGTTGCCATTAAGGCCGTGAGACCTGACATAGCCCACAGAGAGAGGCAATTTCAACAAGAGGTTATTATTTTGAGCACTATAAGACATCCAAGCATGGTGCTCCTCCTAGGAGCATGCGCAGAATTTGGATGCCTTGTGTATGAGTACATGGAAAATGGTAGCTTAGAAGACCGTCTCTTCATGAAAGACAAGACTCCACCAATTCCATGGAAAACACGTTTCAGAATAGCGTTAGAGATTGCTACTGGCCTTCTTTTCCTTCACCAAACAAAACCTGAACCCCTTGTGCATCGTGATTTAAAGCCAGCAAACATTCTATTGGATAAGAACTACATGAGCAAGATTAGTGATGTGGGTTTGGCACGACTTGTTCCCCCTTCTGTGGTTAACAAAACCACACAATATCGCTTGACTGGTGCAGCTGGCACATTTTGCTACATTGATCCTGAGTATCAACAAACTGGTTTGTTGGGTGTGAAATCAGATATATATTCATTCGGTGTAGTGTTGCTCCAGTTAATTACAGGGAAAGCTCCAATGGGTTTGTCACACTTGGTTGAGAAGGCTCTTCAATCTAACACTTTTGGTGAGGTGCTTGATCCAAGTGTCTCAGATTGGCCTGTAGAAGACGCTATGTCATTAGCTAAGTTGGCCTTGAAGTGTTGTGAGTTAAGAAAA 1149 0.4038 VNLEVEMRKLKLELKKTTEKYGMACREAVLAKQKTVQLEKFWHENERNVEEARLAEESALALAEVERQKAKTAMESIEMSQRLAEMESQKRKEVELRARHEEEERNRTLHEVVCNNIPYRRYKIEEIEVATNNFNKSLQIGEGGYGPVFKGVIDHTVVAIKAVRPDIAHRERQFQQEVIILSTIRHPSMVLLLGACAEFGCLVYEYMENGSLEDRLFMKDKTPPIPWKTRFRIALEIATGLLFLHQTKPEPLVHRDLKPANILLDKNYMSKISDVGLARLVPPSVVNKTTQYRLTGAAGTFCYIDPEYQQTGLLGVKSDIYSFGVVLLQLITGKAPMGLSHLVEKALQSNTFGEVLDPSVSDWPVEDAMSLAKLALKCCELRK 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01121 383 FunFam Os07g0541700 protein 207 297 - -
Pste6g01121 383 Coils Coil 83 111 - -
Pste6g01121 383 PANTHER OS02G0152300 PROTEIN 3 382 - -
Pste6g01121 383 Gene3D Transferase(Phosphotransferase) domain 1 207 383 - -
Pste6g01121 383 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 106 206 - -
Pste6g01121 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Pste6g01121 383 Gene3D Phosphorylase Kinase; domain 1 112 206 - -
Pste6g01121 383 Pfam Protein tyrosine and serine/threonine kinase 138 338 IPR001245 GO:0004672|GO:0006468
Pste6g01121 383 ProSiteProfiles Protein kinase domain profile. 134 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01121 383 SMART serkin_6 134 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01121 383 SUPERFAMILY Protein kinase-like (PK-like) 110 379 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01121 Pste-Chr6 4665708 4667922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01121 2 383 Receptor kinase-like Gene Family AT5G12000 62.042 1.93e-170 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pste6g01121 PK_Tyr_Ser-Thr 6.2e-38 CL0016